chr5 : 111,197,561 – 111,197,923
362 bp 51 TFs 1 linked gene
This 362 bp open chromatin element is linked to RPS3AP21 and is bound by 51 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RPS3AP21 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:111,192,561 – 111,202,923
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 158 bp overlap
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 191 bp overlap
ARID1B 1 dataset
ChIP Hep-G2 GSE69566.ARID1B.Hep-G2 284 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 330 bp overlap
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 362 bp overlap
BRD4 3 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 209 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 154 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 208 bp overlap
CEBPA 3 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 125 bp overlap
ChIP HepG2 ENCFF175DFS 99 bp overlap
ChIP liver ERP002306.CEBPA.liver 132 bp overlap
CEBPB 4 datasets
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 132 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 108 bp overlap
ChIP HepG2 ENCFF074JWB 154 bp overlap
ChIP HepG2 ENCFF536NTI 153 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 203 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 154 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 317 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 316 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 314 bp overlap
EGR1 1 dataset
ChIP fibroblast_EtOH-24h GSE134924.EGR1.fibroblast_EtOH-24h 130 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 113 bp overlap
ESR1 1 dataset
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 131 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 117 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 222 bp overlap
HNF4A 8 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 115 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 162 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 133 bp overlap
ChIP HepG2 ENCFF146SSF 238 bp overlap
ChIP HepG2 ENCFF669NAM 177 bp overlap
ChIP liver ENCFF354NRH 96 bp overlap
ChIP liver ENCFF449HPV 146 bp overlap
ChIP liver ERP002306.HNF4A.liver 97 bp overlap
HNF4G 2 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 90 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 105 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 164 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 326 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 289 bp overlap
NFIA 3 datasets
ChIP Hep-G2 GSE97661.NFIA.Hep-G2 182 bp overlap
ChIP HepG2 ENCFF815HWK 197 bp overlap
ChIP K-562 GSE97661.NFIA.K-562 346 bp overlap
NFIB 4 datasets
ChIP MCF-7 ENCFF799WGQ 277 bp overlap
ChIP MCF-7 ENCFF925CGH 137 bp overlap
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 261 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 272 bp overlap
NFIC 8 datasets
ChIP Hep-G2 GSE108514.NFIC.Hep-G2 306 bp overlap
ChIP Hep-G2 ENCSR000BQX.NFIC.Hep-G2 133 bp overlap
ChIP HepG2 ENCFF169TKU 341 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 182 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 338 bp overlap
ChIP K562 ENCFF167YID 258 bp overlap
ChIP SK-N-SH ENCFF965AKM 252 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 219 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 300 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 167 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 362 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 286 bp overlap
SMARCA4 1 dataset
ChIP NGP GSE134626.SMARCA4.NGP 185 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 275 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 219 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 209 bp overlap
TBP 3 datasets
ChIP H1 ENCFF859IIO 328 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 161 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 110 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 127 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 127 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 206 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 146 bp overlap
XBP1 1 dataset
ChIP HS578T_HYPO_GLUDEP GSE49952.XBP1.HS578T_HYPO_GLUDEP 142 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 362 bp overlap
ChIP HEK293 ENCFF865LIO 362 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 293 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 347 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 144 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 126 bp overlap
ZBTB6 2 datasets
ChIP HEK293 ENCFF881ECZ 205 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 213 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 291 bp overlap
ZNF184 1 dataset
ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 266 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 318 bp overlap
ZNF394 1 dataset
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 266 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 318 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 220 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 235 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 213 bp overlap
ZNF770 2 datasets
ChIP HEK293 GSE76494.ZNF770.HEK293 177 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 292 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 149 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 159 bp overlap
Huangfu Lab · Publications · Resources · Contact