chr5 : 80,185,568 80,186,143
575 bp 70 TFs 4 linked genes
This 575 bp open chromatin element is linked to 4 target genes and is bound by 70 transcription factors.
Linked Genes
4 genes
Link type
Gene Expression Dist. to TSS Distance Link type
SERINC5 70.3 kb Distal Multiome+HiCAR
THBS4 194.5 kb Distal Multiome
MTX3 194.5 kb Distal Multiome
ZFYVE16 222.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:80,180,568 – 80,191,143
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 185 bp overlap
Atf3 1 dataset
Motif DE_24h DE_24h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_24h DE_24h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_24h DE_24h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_24h DE_24h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_24h DE_24h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_24h DE_24h-BNC2_MA1928.2 7 bp overlap
BRD4 1 dataset
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 306 bp overlap
CEBPG 2 datasets
ChIP K562 ENCFF783ADE 87 bp overlap
ChIP K562 ENCFF783ADE 354 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 222 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 145 bp overlap
FOS 1 dataset
Motif DE_24h DE_24h-FOS_MA0476.2 8 bp overlap
FOSL1 1 dataset
Motif DE_24h DE_24h-FOSL1_MA0477.3 9 bp overlap
FOSL2 1 dataset
Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 407 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 391 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 115 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 164 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HOXB13 1 dataset
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
HOXC13 1 dataset
Motif DE_24h DE_24h-HOXC13_MA0907.2 9 bp overlap
JDP2 1 dataset
Motif DE_24h DE_24h-JDP2_MA0655.1 9 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 518 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 395 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 575 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 575 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 407 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 357 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 292 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 490 bp overlap
JUNB 1 dataset
Motif DE_24h DE_24h-JUNB_MA0490.3 9 bp overlap
JUND 2 datasets
Motif DE_24h DE_24h-JUND_MA0491.3 9 bp overlap
ChIP H1 ENCFF010YXS 311 bp overlap
Jun 1 dataset
Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap
KLF1 1 dataset
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
KLF2 1 dataset
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
MAFK 1 dataset
Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap
Mafg 1 dataset
Motif DE_24h DE_24h-Mafg_MA0659.4 12 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 568 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 148 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 284 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 575 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 344 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 78 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 322 bp overlap
NFE2 1 dataset
Motif DE_24h DE_24h-NFE2_MA0841.2 10 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 377 bp overlap
Nfat5 1 dataset
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
Nfe2l2 1 dataset
Motif DE_24h DE_24h-Nfe2l2_MA0150.3 11 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 239 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 291 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 412 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 248 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 303 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 427 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 311 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 182 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 83 bp overlap
TBP 1 dataset
Motif DE_24h DE_24h-TBP_MA0108.3 7 bp overlap
TEAD1 2 datasets
ChIP WTC11 ENCFF502QUV 378 bp overlap
ChIP WTC11 ENCFF502QUV 397 bp overlap
Tfcp2l1 1 dataset
Motif DE_24h DE_24h-Tfcp2l1_MA0145.2 14 bp overlap
Wt1 1 dataset
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF157 1 dataset
Motif DE_24h DE_24h-ZNF157_MA2331.1 21 bp overlap
ZNF211 1 dataset
Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 84 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap