chr5 : 39,864,047 – 39,864,245
198 bp 46 TFs 0 linked genes
This 198 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:39,859,047 – 39,869,245
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
AR 37 datasets
ChIP LNCaP GSE110655.AR.LNCaP 198 bp overlap
ChIP LNCaP GSE117430.AR.LNCaP 166 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 68 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 198 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 198 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 198 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 101 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 118 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 110 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 97 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 198 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 198 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 198 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 92 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 198 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 198 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 198 bp overlap
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 158 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 74 bp overlap
ChIP prostate GSE65478.AR.prostate 198 bp overlap
ChIP prostate GSE56288.AR.prostate 143 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 133 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 124 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 86 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 86 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 64 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 198 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 156 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 198 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 198 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 198 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 198 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 52 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 198 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 198 bp overlap
ChIP prostate_P29_T GSE130408.AR.prostate_P29_T 140 bp overlap
ChIP prostate_P5_T GSE130408.AR.prostate_P5_T 114 bp overlap
ASH2L 2 datasets
ChIP VCaP GSE60841.ASH2L.VCaP 104 bp overlap
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 162 bp overlap
BRD4 4 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 76 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 198 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 107 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 110 bp overlap
ERG 5 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 130 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 62 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 62 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 109 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 130 bp overlap
ESR1 8 datasets
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 198 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 198 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 198 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 85 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 73 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 186 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 128 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 198 bp overlap
ETV1 1 dataset
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 86 bp overlap
ETV5::FOXI1 1 dataset
Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap
FOXA1 27 datasets
ChIP LNCaP GSE56288.FOXA1.LNCaP 140 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 198 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 63 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 198 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 198 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 198 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 52 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 185 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 198 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 85 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 198 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 130 bp overlap
ChIP breast_tumor_Male_4 GSE104399.FOXA1.breast_tumor_Male_4 179 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 198 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 159 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 198 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 198 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 67 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 58 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 198 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 198 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 198 bp overlap
ChIP prostate_P25 GSE130408.FOXA1.prostate_P25 149 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 198 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 198 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 135 bp overlap
GABPA 2 datasets
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 141 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 136 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 198 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-N 157 bp overlap
HOXB13 20 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 198 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 66 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 58 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 198 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 198 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 147 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 198 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 116 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 113 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 198 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 198 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 198 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 127 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 198 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 198 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 198 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 198 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 143 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 198 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 68 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
JMJD6 1 dataset
ChIP HeLa GSE51633.JMJD6.HeLa 127 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
MED1 1 dataset
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 198 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYC 1 dataset
ChIP LNCaP GSE117430.MYC.LNCaP 198 bp overlap
MYCN 1 dataset
ChIP 22Rv1_intact GSE117304.MYCN.22Rv1_intact 135 bp overlap
NR3C1 1 dataset
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 87 bp overlap
Nr5A2 1 dataset
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
PGR 3 datasets
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 198 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 198 bp overlap
ChIP breast_tumor_Male_30 GSE104399.PGR.breast_tumor_Male_30 84 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 198 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 198 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 144 bp overlap
RELB 1 dataset
ChIP L1236 GSE63736.RELB.L1236 88 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 198 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 198 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 198 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 134 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 198 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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