chr4 : 135,184,625 – 135,185,162

537 bp 62 TFs 0 linked genes

This 537 bp open chromatin element has no linked target genes and is bound by 62 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

62 transcription factors

AR 2 datasets

ChIP WTC11 ENCFF267GQJ 253 bp overlap

ChIP WTC11 ENCFF267GQJ 317 bp overlap

ASH2L 3 datasets

ChIP H1 ENCFF399KAM 537 bp overlap

ChIP H1 ENCFF399KAM 372 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 424 bp overlap

Ahr::Arnt 2 datasets

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

BARX2 1 dataset

Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD4 1 dataset

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 229 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 231 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 301 bp overlap

CTCF 2 datasets

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 152 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF262VBH 328 bp overlap

ChIP BLaER1 ENCFF335XTP 251 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

Ddit3::Cebpa 1 dataset

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 150 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 295 bp overlap

EOMES 1 dataset

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

Hmga1 1 dataset

Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap

JUN 2 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 293 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 263 bp overlap

KDM4A 1 dataset

ChIP WA01 ENCSR000AVC.KDM4A.WA01 208 bp overlap

MEF2A 1 dataset

Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap

MEF2B 1 dataset

Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap

MEF2C 1 dataset

Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap

MEF2D 1 dataset

Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap

NANOG 4 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 119 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 509 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 298 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 210 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PAX6 1 dataset

Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap

PAX8 1 dataset

Motif DE_12h DE_12h-PAX8_MA2094.1 16 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 537 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 188 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 414 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 368 bp overlap

RNF2 1 dataset

ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 216 bp overlap

RYBP 1 dataset

ChIP WA01 GSE104690.RYBP.WA01 435 bp overlap

SIN3A 1 dataset

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 157 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 455 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 527 bp overlap

SMARCB1 3 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 472 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 180 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 179 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 336 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 422 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 185 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 208 bp overlap

Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

Stat6 1 dataset

Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap

TBR1 1 dataset

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

TBX18 1 dataset

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

TBX21 1 dataset

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

TEAD4 2 datasets

ChIP H1 ENCFF778PAX 245 bp overlap

ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 537 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Tfcp2l1 1 dataset

Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

ZBTB1 1 dataset

ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 64 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 313 bp overlap

ZNF136 1 dataset

Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap

ZNF384 1 dataset

Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap

ZNF396 1 dataset

ChIP WTC11 ENCFF776JWJ 301 bp overlap

ZNF449 1 dataset

Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 388 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

ZNF574 1 dataset

Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap

ZNF684 1 dataset

Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap

ZNF770 1 dataset

Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap

ZSCAN16 1 dataset

Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap