chr4 : 112,514,209 – 112,514,384
175 bp 47 TFs 2 linked genes
This 175 bp open chromatin element is linked to NEUROG2-AS1 and NEUROG2 and is bound by 47 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NEUROG2-AS1 1.0 kb Proximal Proximity
NEUROG2 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:112,509,209 – 112,519,384
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 175 bp overlap
ChIP H1 ENCFF399KAM 175 bp overlap
ChIP H1 ENCFF399KAM 175 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 175 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 71 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 111 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 118 bp overlap
CBX2 1 dataset
ChIP K562 ENCFF578AQI 175 bp overlap
CBX4 1 dataset
ChIP HEK293T GSE53495.CBX4.HEK293T 60 bp overlap
CBX7 4 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 102 bp overlap
ChIP hESC GSE133412.CBX7.hESC 126 bp overlap
ChIP hESC_QKO GSE133412.CBX7.hESC_QKO 142 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 141 bp overlap
CBX8 2 datasets
ChIP A-549 ENCSR616MOB.CBX8.A-549 175 bp overlap
ChIP A549 ENCFF656LMW 66 bp overlap
CTCF 3 datasets
ChIP KMS-11 ENCFF853JKX 175 bp overlap
ChIP KMS-11 ENCFF853JKX 62 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 97 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 102 bp overlap
EZH2 17 datasets
ChIP GM23248 ENCFF404ZHM 166 bp overlap
ChIP GM23338 ENCFF613YON 78 bp overlap
ChIP H1 ENCFF232NZA 175 bp overlap
ChIP HepG2 ENCFF912EIW 175 bp overlap
ChIP KG-1_shPLZF GSE109619.EZH2.KG-1_shPLZF 67 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 122 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 110 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 175 bp overlap
ChIP fibroblast of lung ENCFF479BAW 175 bp overlap
ChIP fibroblast of lung ENCFF479BAW 96 bp overlap
ChIP hepatocyte ENCFF118DKH 97 bp overlap
ChIP keratinocyte ENCFF070STK 175 bp overlap
ChIP keratinocyte ENCFF070STK 73 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 63 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 155 bp overlap
ChIP neural progenitor cell ENCFF018MKA 175 bp overlap
ChIP neural progenitor cell ENCFF472NFV 175 bp overlap
EZH2_phosphoT487 2 datasets
ChIP PC-3 ENCSR617RSQ.EZH2_phosphoT487.PC-3 64 bp overlap
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 96 bp overlap
GATA6 2 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 154 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 175 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 163 bp overlap
ChIP GM12878 ENCFF781IAU 175 bp overlap
GFI1 1 dataset
ChIP THP-1 GSE90769.GFI1.THP-1 52 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 175 bp overlap
JARID2 1 dataset
ChIP hESC_TKO GSE133412.JARID2.hESC_TKO 138 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 175 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 175 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 175 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 157 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 175 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 170 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 175 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 155 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 99 bp overlap
POLR2A 1 dataset
ChIP GM19193 ENCFF599VTO 175 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 175 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 175 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 175 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 175 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 175 bp overlap
RBPJ 2 datasets
ChIP LCL GSE75503.RBPJ.LCL 83 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 157 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 175 bp overlap
RNF2 5 datasets
ChIP H1 ENCFF239FFS 163 bp overlap
ChIP H1 ENCFF239FFS 163 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.RNF2.HEK293T_PCGF1356fl 76 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 80 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 100 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 175 bp overlap
SIN3A 1 dataset
ChIP GM12878 ENCFF238GUI 113 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 175 bp overlap
SMAD5 1 dataset
ChIP GM12878 ENCFF178LKN 175 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 106 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 90 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 175 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 93 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 96 bp overlap
SUZ12 12 datasets
ChIP H1 ENCFF881NFR 175 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 108 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 146 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 164 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 100 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 161 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 134 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 175 bp overlap
ChIP NT2/D1 ENCFF574SXS 175 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 53 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 52 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 148 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 175 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 175 bp overlap
YY1 1 dataset
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 67 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 83 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 139 bp overlap
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