chr4 : 82,688,315 82,688,748
433 bp 88 TFs 0 linked genes
This 433 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:82,683,315 – 82,693,748
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap
BCL11A 13 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 355 bp overlap
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 128 bp overlap
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 59 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 69 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 218 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 302 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 320 bp overlap
ChIP CD34_Day9_15min GSE104676.BCL11A.CD34_Day9_15min 57 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 88 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 162 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 86 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 73 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 169 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 241 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 407 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 324 bp overlap
Bcl11B 1 dataset
Motif DE_60h DE_60h-Bcl11B_MA1989.2 9 bp overlap
CEBPD 1 dataset
ChIP Hep-G2 ENCSR000BQJ.CEBPD.Hep-G2 116 bp overlap
CTCF 2 datasets
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
DPRX 1 dataset
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 238 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 196 bp overlap
FIGLA 2 datasets
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 433 bp overlap
ChIP DE DE-FOXA2-2 433 bp overlap
GATA1 7 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 310 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 359 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 338 bp overlap
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 393 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 333 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 277 bp overlap
GATA2 3 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 258 bp overlap
ChIP CD34_DMSO GSE60792.GATA2.CD34_DMSO 156 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 433 bp overlap
GATA4 7 datasets
ChIP A-549 GSE85002.GATA4.A-549 186 bp overlap
ChIP DE DE-GATA4-1 433 bp overlap
ChIP DE DE-GATA4-2 433 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 319 bp overlap
ChIP foregut GSE117136.GATA4.foregut 421 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 428 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 433 bp overlap
ChIP DE DE-GATA6-2 433 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 433 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 414 bp overlap
ChIP foregut GSE117136.GATA6.foregut 433 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 423 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 338 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap
HOXB13 1 dataset
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 217 bp overlap
HSF1 1 dataset
Motif DE_60h DE_60h-HSF1_MA0486.2 13 bp overlap
HSF2 1 dataset
Motif DE_60h DE_60h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif DE_60h DE_60h-HSF4_MA0771.1 13 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 190 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 132 bp overlap
Irf1 1 dataset
Motif DE_72h DE_72h-Irf1_MA0050.4 11 bp overlap
KDM1A 1 dataset
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 86 bp overlap
KLF13 1 dataset
Motif DE_60h DE_60h-KLF13_MA0657.2 17 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 212 bp overlap
MEF2C 1 dataset
ChIP GM12878 ENCSR000BNG.MEF2C.GM12878 135 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 289 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 313 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 182 bp overlap
NEUROD1 3 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 272 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 292 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 254 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 425 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 433 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 217 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 395 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCFF482PUW 84 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 61 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 58 bp overlap
POU1F1 1 dataset
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
POU3F3 1 dataset
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
RELA 13 datasets
ChIP HAEC GSE89970.RELA.HAEC 134 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 347 bp overlap
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 151 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 306 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 171 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 351 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 166 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 289 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 169 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 264 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 180 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 197 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 308 bp overlap
RELB 2 datasets
ChIP GM12878 ENCSR387QUV.RELB.GM12878 392 bp overlap
ChIP L1236 GSE63736.RELB.L1236 212 bp overlap
RFX4 1 dataset
Motif DE_60h DE_60h-RFX4_MA0799.3 13 bp overlap
RUNX2 2 datasets
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 176 bp overlap
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 318 bp overlap
Runx1 1 dataset
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SCRT1 1 dataset
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_60h DE_60h-SCRT2_MA0744.3 10 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 269 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 433 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 366 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 370 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 357 bp overlap
SNAI1 1 dataset
Motif DE_60h DE_60h-SNAI1_MA1558.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 329 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 396 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 321 bp overlap
Stat5b 1 dataset
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
TAL1 3 datasets
ChIP CD34 GSE52924.TAL1.CD34 280 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 169 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 234 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 294 bp overlap
TCF12 2 datasets
Motif DE_60h DE_60h-TCF12_MA1648.2 7 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 112 bp overlap
TCF3 1 dataset
Motif DE_60h DE_60h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
TP63 15 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 433 bp overlap
Motif DE_60h DE_60h-TP63_MA0525.2 18 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 154 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 433 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 76 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 128 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 67 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 132 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 225 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 140 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 201 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 132 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 248 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 114 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 190 bp overlap
TP73 1 dataset
Motif DE_60h DE_60h-TP73_MA0861.2 16 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 226 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 51 bp overlap
ZBTB26 1 dataset
Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap
ZBTB32 1 dataset
Motif DE_72h DE_72h-ZBTB32_MA1580.1 10 bp overlap
ZEB1 2 datasets
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZIC1 1 dataset
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZNF382 1 dataset
Motif DE_60h DE_60h-ZNF382_MA1594.1 24 bp overlap
ZNF549 1 dataset
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
ZNF574 1 dataset
Motif DE_60h DE_60h-ZNF574_MA1982.2 14 bp overlap
ZNF768 1 dataset
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap
ZNF816 1 dataset
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap