chr4 : 40,195,690 40,195,982
292 bp 65 TFs 1 linked gene
This 292 bp open chromatin element is linked to RHOH and is bound by 65 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RHOH 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:40,190,690 – 40,200,982
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 106 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCFF576UEQ 292 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 157 bp overlap
BCOR 1 dataset
ChIP K562 ENCFF343XWA 164 bp overlap
BRD4 9 datasets
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 292 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 292 bp overlap
ChIP COLO-205 GSE73319.BRD4.COLO-205 292 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 235 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 198 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 115 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 189 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 204 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 292 bp overlap
CBX3 1 dataset
ChIP K562 ENCFF410AQU 221 bp overlap
CDK9 1 dataset
ChIP P493-6 GSE36354.CDK9.P493-6 267 bp overlap
CHD1 1 dataset
ChIP GM12878 ENCFF566UBH 251 bp overlap
CHD4 2 datasets
ChIP K562 ENCFF933NKI 249 bp overlap
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 187 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 147 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 253 bp overlap
ETV6 2 datasets
ChIP GM12878 GSE97661.ETV6.GM12878 122 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 292 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 76 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 284 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 292 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 292 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 292 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 292 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 292 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 292 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCFF781IAU 292 bp overlap
GTF2I 2 datasets
ChIP K562 ENCFF539BYI 204 bp overlap
ChIP WTC11 ENCFF255XXZ 184 bp overlap
HDAC2 6 datasets
ChIP GM12878 ENCFF063XXQ 292 bp overlap
ChIP H1 ENCFF353UJQ 103 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 292 bp overlap
ChIP K562 ENCFF744ALD 230 bp overlap
ChIP K562 ENCFF919OMP 88 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 129 bp overlap
HDGF 1 dataset
ChIP GM12878 ENCFF653WYI 50 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 72 bp overlap
IRF4 2 datasets
ChIP T-cell GSE136853.IRF4.T-cell 82 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 109 bp overlap
KDM1A 19 datasets
ChIP A-549 ENCSR639GWS.KDM1A.A-549 196 bp overlap
ChIP H1 ENCFF696SGD 112 bp overlap
ChIP HepG2 ENCFF240UWG 117 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 292 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 204 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 123 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 292 bp overlap
ChIP K562 ENCFF128TYE 120 bp overlap
ChIP K562 ENCFF133OLU 291 bp overlap
ChIP K562 ENCFF934ZRG 249 bp overlap
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 106 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 79 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 152 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 292 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 146 bp overlap
ChIP SU-DHL-4 GSE119038.KDM1A.SU-DHL-4 121 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 292 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 139 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 156 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 245 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 108 bp overlap
MAX 2 datasets
ChIP P493-6 GSE36354.MAX.P493-6 233 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 152 bp overlap
MED1 1 dataset
ChIP Jurkat GSE59657.MED1.Jurkat 112 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 292 bp overlap
MYB 2 datasets
ChIP MOLT-3 GSE59657.MYB.MOLT-3 153 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 244 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 136 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 72 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 70 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 292 bp overlap
POLR2A 3 datasets
ChIP GM12878 ENCFF521FXC 258 bp overlap
ChIP GM12878 ENCFF521FXC 56 bp overlap
ChIP Raji ENCFF613VGX 146 bp overlap
PTBP1 2 datasets
ChIP K562 ENCFF773HPT 200 bp overlap
ChIP K562 ENCFF773HPT 204 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 292 bp overlap
ChIP K562 ENCFF248CGR 199 bp overlap
ChIP K562 ENCFF957ORK 199 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 109 bp overlap
REL 1 dataset
ChIP Ramos GSE139810.REL.Ramos 180 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 171 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 139 bp overlap
SIN3A 2 datasets
ChIP GM12878 ENCFF238GUI 292 bp overlap
ChIP GM12878 ENCFF238GUI 230 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 196 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 131 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 174 bp overlap
SMARCA5 3 datasets
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 292 bp overlap
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 292 bp overlap
ChIP K562 ENCFF936KHY 266 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 282 bp overlap
STAT3 1 dataset
ChIP GM12878 ENCFF098ABL 160 bp overlap
TAF1 1 dataset
ChIP GM12892 ENCFF440DJD 152 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 164 bp overlap
TBP 1 dataset
ChIP GM12878 ENCFF571OXR 79 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCFF951HUW 222 bp overlap
TCF3 4 datasets
ChIP GM12878 ENCFF658WIO 168 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 143 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 91 bp overlap
ChIP Ramos GSE139810.TCF3.Ramos 292 bp overlap
ZEB1 2 datasets
ChIP GM12878 ENCFF148RLQ 126 bp overlap
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 76 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 249 bp overlap
ZMYM3 8 datasets
ChIP GM12878 GSE97661.ZMYM3.GM12878 292 bp overlap
ChIP Hep-G2 ENCSR848YWD.ZMYM3.Hep-G2 81 bp overlap
ChIP Hep-G2_AC_JH39-2-2B9 GSE97661.ZMYM3.Hep-G2_AC_JH39-2-2B9 200 bp overlap
ChIP HepG2 ENCFF408KTI 292 bp overlap
ChIP HepG2 ENCFF667RVD 292 bp overlap
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 292 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 292 bp overlap
ChIP K562 ENCFF361LXT 129 bp overlap
ZNF121 7 datasets
ChIP HEK293 ENCFF839FUF 142 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 53 bp overlap
ChIP HEK293 GSE76494.ZNF121.HEK293 98 bp overlap
ChIP Hep-G2 ENCSR945QEW.ZNF121.Hep-G2 128 bp overlap
ChIP HepG2 ENCFF343YSL 209 bp overlap
ChIP K562 ENCFF314GND 189 bp overlap
ChIP WTC11 ENCFF291API 141 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 145 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 97 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 270 bp overlap
ZNF623 2 datasets
ChIP HEK293 ENCFF505YHP 170 bp overlap
ChIP HEK293 ENCSR022IZK.ZNF623.HEK293 203 bp overlap