chr4 : 20,431,508 – 20,432,418
910 bp 53 TFs 0 linked genes
This 910 bp open chromatin element has no linked target genes and is bound by 53 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:20,426,508 – 20,437,418
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
53 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 159 bp overlap
ChIP prostate GSE56288.AR.prostate 347 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 200 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 307 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 321 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 198 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 152 bp overlap
ATF3 1 dataset
ChIP primary-dermal-fibroblasts_overexpressed GSE81403.ATF3.primary-dermal-fibroblasts_overexpressed 80 bp overlap
BRD4 1 dataset
ChIP HAP1 GSE108387.BRD4.HAP1 793 bp overlap
CDK8 1 dataset
ChIP myometrium_PT848 GSE128230.CDK8.myometrium_PT848 74 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 158 bp overlap
CEBPD 1 dataset
ChIP HAEC_IL1b_4h GSE89970.CEBPD.HAEC_IL1b_4h 146 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 165 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 254 bp overlap
CTCF 116 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 331 bp overlap
ChIP A673 ENCFF123WOM 199 bp overlap
ChIP AG04450 ENCFF116DJL 256 bp overlap
ChIP AG09319 ENCFF401ZTN 246 bp overlap
ChIP ASC GSE21366.CTCF.ASC 217 bp overlap
ChIP BE2C ENCFF757SRF 254 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 169 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 103 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 157 bp overlap
ChIP GM23338 ENCFF531QOI 191 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H9 ENCFF152GTF 229 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 268 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 177 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 234 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 243 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 204 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 167 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 244 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 201 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 276 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 247 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 221 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 180 bp overlap
ChIP HFFc6 ENCFF005CJI 385 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 231 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 136 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 116 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 349 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 111 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 181 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 173 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 112 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 99 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 114 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 176 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 232 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 302 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 261 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 289 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 218 bp overlap
ChIP brain ENCFF099ASU 358 bp overlap
ChIP brain ENCFF163BBN 351 bp overlap
ChIP brain ENCFF685VRG 353 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 281 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 213 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 272 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 313 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 136 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 273 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 163 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 148 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 329 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 457 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 357 bp overlap
ChIP endodermal cell ENCFF471YCZ 214 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 237 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 269 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 261 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 218 bp overlap
ChIP esophagus muscularis mucosa ENCFF045JBW 260 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 300 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 257 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 145 bp overlap
ChIP fibroblast of lung ENCFF084DUH 287 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 237 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 108 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 217 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 205 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 170 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 185 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 180 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 127 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 171 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 281 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 188 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 328 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 324 bp overlap
ChIP gastroesophageal sphincter ENCFF607YRA 352 bp overlap
ChIP gastroesophageal sphincter ENCFF918KPI 262 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 205 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 253 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 281 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 212 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 288 bp overlap
ChIP heart left ventricle ENCFF354HOQ 357 bp overlap
ChIP heart right ventricle ENCFF027ORH 326 bp overlap
ChIP heart right ventricle ENCFF435TKW 311 bp overlap
ChIP heart right ventricle ENCFF767XJQ 318 bp overlap
ChIP heart right ventricle ENCFF979TCT 355 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 210 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 247 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 153 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 138 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 139 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 121 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 146 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 121 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 140 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 344 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 226 bp overlap
ChIP neural progenitor cell ENCFF420RBO 166 bp overlap
ChIP neural progenitor cell ENCFF581WPG 447 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 278 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 165 bp overlap
ChIP osteoblast ENCFF491ZJZ 319 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 270 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 264 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 133 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 232 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 212 bp overlap
ChIP testis ENCFF409BGH 265 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 172 bp overlap
ChIP uterus ENCFF837OEY 281 bp overlap
ChIP uterus ENCSR684PGO.CTCF.uterus 209 bp overlap
ChIP uterus ENCSR527TPP.CTCF.uterus 268 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 92 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
EP300 2 datasets
ChIP esophagus muscularis mucosa ENCFF406RGZ 162 bp overlap
ChIP gastroesophageal sphincter ENCFF211FPL 115 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 167 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 215 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 225 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 233 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 165 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 272 bp overlap
GATA2 8 datasets
ChIP ESF GSE108408.GATA2.ESF 270 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 157 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 266 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 130 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 326 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 168 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 281 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 389 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 708 bp overlap
GATA6 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 265 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 169 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 329 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 159 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 173 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 307 bp overlap
MED12 5 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 143 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 95 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 72 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 76 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 98 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 124 bp overlap
NEUROD1 8 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 232 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 206 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 357 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 341 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 256 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 236 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 457 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 365 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 263 bp overlap
NR3C1 2 datasets
ChIP IMR-90 ERP007093.NR3C1.IMR-90 148 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 189 bp overlap
OTX2 2 datasets
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 158 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 206 bp overlap
PGR 5 datasets
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 150 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 316 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 682 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 155 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 188 bp overlap
POLR2A 3 datasets
ChIP gastroesophageal sphincter ENCFF070PCA 341 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 130 bp overlap
ChIP stomach ENCFF820WZN 199 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 119 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 182 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 139 bp overlap
RELA 3 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 151 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 162 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 184 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 128 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 87 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 297 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 149 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 401 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 251 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 88 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 502 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 168 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 120 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 425 bp overlap
STAT3 1 dataset
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 85 bp overlap
TARDBP 2 datasets
ChIP HEK293T ENCFF840XEZ 341 bp overlap
ChIP HEK293T ENCSR753GIA.TARDBP.HEK293T 269 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 186 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 186 bp overlap
ZNF24 4 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 608 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 559 bp overlap
ChIP K562 ENCFF615YYW 274 bp overlap
ChIP K562 ENCFF877JCX 244 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 297 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 451 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 304 bp overlap
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