chr4 : 12,363,868 – 12,364,421
553 bp 75 TFs 0 linked genes
This 553 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:12,358,868 – 12,369,421
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ATF2 3 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif ES_0h ES_0h-ATF2_MA1632.2 10 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BACH2 2 datasets
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
Motif ES_0h ES_0h-BACH2_MA1470.2 19 bp overlap
BCL11A 1 dataset
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
BCL6B 1 dataset
Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap
CEBPA 2 datasets
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
CEBPD 2 datasets
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CREB1 3 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
E2F8 1 dataset
Motif ES_0h ES_0h-E2F8_MA0865.3 9 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELK1::HOXA1 2 datasets
Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap
Motif ES_0h ES_0h-ELK1HOXA1_MA1931.1 14 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif ES_0h ES_0h-FOS_MA1951.2 13 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
FOSB::JUN 2 datasets
Motif DE_12h DE_12h-FOSBJUN_MA1127.1 11 bp overlap
Motif ES_0h ES_0h-FOSBJUN_MA1127.1 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 212 bp overlap
ChIP DE DE-FOXA2-2 171 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 492 bp overlap
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 299 bp overlap
ChIP DE DE-GATA6-2 412 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 217 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 259 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 436 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 219 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 85 bp overlap
HOXB13 1 dataset
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 1 dataset
Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 8 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 553 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 427 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 385 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 281 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 340 bp overlap
Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap
JUND 3 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
Motif ES_0h ES_0h-JUND_MA0492.2 11 bp overlap
KLF13 1 dataset
Motif ES_0h ES_0h-KLF13_MA0657.2 17 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
MAFF 3 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 1 dataset
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Mafb 3 datasets
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
Mecom 2 datasets
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
Motif ES_0h ES_0h-Mecom_MA0029.2 11 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 196 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 163 bp overlap
NEUROD1 1 dataset
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif ES_0h ES_0h-NR2F1_MA0017.3 12 bp overlap
NRL 3 datasets
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Nfat5 1 dataset
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RELA 2 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Motif ES_0h ES_0h-RELA_MA0107.1 10 bp overlap
RORC 1 dataset
Motif ES_0h ES_0h-RORC_MA1151.2 10 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 159 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 325 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 325 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 360 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 423 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SPIB 3 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
TBP 1 dataset
Motif ES_0h ES_0h-TBP_MA0108.3 7 bp overlap
TBX19 2 datasets
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
Motif ES_0h ES_0h-TBX19_MA0804.2 17 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
VEZF1 2 datasets
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Motif ES_0h ES_0h-VEZF1_MA1578.2 6 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZBTB40 3 datasets
ChIP HepG2 ENCFF130IRD 484 bp overlap
ChIP K562 ENCFF521DSV 137 bp overlap
ChIP MCF-7 ENCFF044DWL 445 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF667 2 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF707 2 datasets
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF740 3 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif ES_0h ES_0h-ZNF740_MA0753.3 10 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
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