chr3 : 122,390,522 122,390,974
452 bp 79 TFs 2 linked genes
This 452 bp open chromatin element is linked to FAM162A and MIX23 and is bound by 79 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
FAM162A 6.3 kb Proximal Proximity
MIX23 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:122,385,522 – 122,395,974
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 354 bp overlap
ChIP K562 ENCFF938UXQ 229 bp overlap
Ascl2 2 datasets
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap
BCL11A 6 datasets
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 62 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 69 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 54 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 63 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 106 bp overlap
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 134 bp overlap
BHLHE22 2 datasets
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_72h DE_72h-BHLHE22_MA1635.2 6 bp overlap
Bhlha15 2 datasets
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_72h DE_72h-Bhlha15_MA1472.3 8 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 393 bp overlap
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 373 bp overlap
ChIP K562 ENCFF673OEZ 325 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 138 bp overlap
EGR1 1 dataset
ChIP monocyte GSE136216.EGR1.monocyte 199 bp overlap
EHF 1 dataset
Motif DE_72h DE_72h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_72h DE_72h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 147 bp overlap
ELF2 1 dataset
Motif DE_72h DE_72h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_72h DE_72h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_72h DE_72h-ELF4_MA0641.1 12 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
ETV1 1 dataset
Motif DE_72h DE_72h-ETV1_MA0761.3 9 bp overlap
Elf5 1 dataset
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_72h DE_72h-Erg_MA0474.4 10 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 361 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 415 bp overlap
ChIP DE DE-FOXA2-2 311 bp overlap
GABPA 1 dataset
Motif DE_72h DE_72h-GABPA_MA0062.4 10 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 217 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 101 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 330 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 190 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 195 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 224 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
ChIP erythroblast ENCFF867JAR 452 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 436 bp overlap
GATA2 2 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 142 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 452 bp overlap
ChIP DE DE-GATA4-2 436 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 364 bp overlap
ChIP DE DE-GATA6-2 433 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 76 bp overlap
ChIP liver ENCFF449HPV 138 bp overlap
ChIP liver ERP002306.HNF4A.liver 119 bp overlap
IKZF1 1 dataset
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_72h DE_72h-Ikzf3_MA1992.2 9 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 195 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 423 bp overlap
MSC 2 datasets
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
Motif DE_72h DE_72h-MSC_MA0665.1 10 bp overlap
MYF5 2 datasets
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
Motif DE_72h DE_72h-MYF5_MA1641.2 8 bp overlap
MYF6 2 datasets
Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap
Motif DE_72h DE_72h-MYF6_MA0667.1 10 bp overlap
MYOD1 2 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
MYOG 2 datasets
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
Motif DE_72h DE_72h-MYOG_MA0500.3 8 bp overlap
NCOR1 3 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 257 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 226 bp overlap
ChIP K562 ENCFF788MPU 412 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 104 bp overlap
NFIC 1 dataset
ChIP K-562 ENCSR796ITY.NFIC.K-562 259 bp overlap
NHLH1 2 datasets
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
Motif DE_72h DE_72h-NHLH1_MA0048.3 9 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 243 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 179 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PKNOX2 2 datasets
Motif DE_60h DE_60h-PKNOX2_MA0783.1 12 bp overlap
Motif DE_72h DE_72h-PKNOX2_MA0783.1 12 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 199 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF044PYR 307 bp overlap
Prdm14 2 datasets
Motif DE_60h DE_60h-Prdm14_MA1998.2 8 bp overlap
Motif DE_72h DE_72h-Prdm14_MA1998.2 8 bp overlap
Ptf1A 4 datasets
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 290 bp overlap
SFPQ 1 dataset
ChIP LTAD_DHT-1nM GSE94577.SFPQ.LTAD_DHT-1nM 77 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 307 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 254 bp overlap
TAL1 13 datasets
ChIP CD34 GSE52924.TAL1.CD34 216 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 130 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 402 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 253 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 207 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 245 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 240 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 287 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 230 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 277 bp overlap
ChIP K562 ENCFF620GMX 210 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 264 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 313 bp overlap
ChIP K562 ENCFF931DJY 375 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 254 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 241 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 176 bp overlap
TFAP4 2 datasets
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
Motif DE_72h DE_72h-TFAP4_MA0691.1 10 bp overlap
TGIF1 2 datasets
Motif DE_60h DE_60h-TGIF1_MA0796.1 12 bp overlap
Motif DE_72h DE_72h-TGIF1_MA0796.1 12 bp overlap
TGIF2 2 datasets
Motif DE_60h DE_60h-TGIF2_MA0797.1 12 bp overlap
Motif DE_72h DE_72h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 2 datasets
Motif DE_60h DE_60h-TGIF2LX_MA1571.1 12 bp overlap
Motif DE_72h DE_72h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 2 datasets
Motif DE_60h DE_60h-TGIF2LY_MA1572.1 12 bp overlap
Motif DE_72h DE_72h-TGIF2LY_MA1572.1 12 bp overlap
Tcf12 2 datasets
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Tcf21 2 datasets
Motif DE_60h DE_60h-Tcf21_MA0832.2 10 bp overlap
Motif DE_72h DE_72h-Tcf21_MA0832.2 10 bp overlap
Twist2 2 datasets
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 162 bp overlap
ZBTB18 2 datasets
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 76 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 372 bp overlap
ZNF175 1 dataset
Motif DE_72h DE_72h-ZNF175_MA2332.1 9 bp overlap