chr3 : 108,723,372 – 108,724,368

996 bp 56 TFs 0 linked genes

This 996 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

56 transcription factors

ATF4 2 datasets

Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap

Motif DE_72h DE_72h-ATF4_MA0833.3 10 bp overlap

BRD4 1 dataset

ChIP SEM GSE83671.BRD4.SEM 67 bp overlap

CDK9 1 dataset

ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 125 bp overlap

CEBPG 2 datasets

Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap

Motif DE_72h DE_72h-CEBPG_MA1636.2 10 bp overlap

DUX4 2 datasets

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap

DUXA 2 datasets

Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap

Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap

Dux 2 datasets

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap

ELK1::HOXB13 1 dataset

Motif DE_60h DE_60h-ELK1HOXB13_MA1932.2 15 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 279 bp overlap

ETV5::DRGX 2 datasets

Motif DE_60h DE_60h-ETV5DRGX_MA1944.2 12 bp overlap

Motif DE_72h DE_72h-ETV5DRGX_MA1944.2 12 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 59 bp overlap

Elf5 1 dataset

Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap

FLI1 1 dataset

ChIP A-673_D17 GSE129155.FLI1.A-673_D17 102 bp overlap

FOS 2 datasets

Motif DE_60h DE_60h-FOS_MA0476.2 8 bp overlap

Motif DE_72h DE_72h-FOS_MA0476.2 8 bp overlap

FOSB::JUN 1 dataset

Motif DE_60h DE_60h-FOSBJUN_MA1127.1 11 bp overlap

FOSL1::JUND 2 datasets

Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap

Motif DE_72h DE_72h-FOSL1JUND_MA1142.2 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 626 bp overlap

ChIP DE DE-FOXA2-2 551 bp overlap

FOXH1 1 dataset

Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap

GATA3 1 dataset

ChIP Jurkat GSE120063.GATA3.Jurkat 81 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 808 bp overlap

ChIP DE DE-GATA4-2 845 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 535 bp overlap

ChIP DE DE-GATA6-2 888 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 351 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 379 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 482 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 438 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 263 bp overlap

HOXB2::ELK1 1 dataset

Motif DE_60h DE_60h-HOXB2ELK1_MA1957.1 14 bp overlap

IKZF2 1 dataset

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

INSM1 1 dataset

Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap

Jun 2 datasets

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

Motif DE_72h DE_72h-Jun_MA0489.3 8 bp overlap

KLF13 1 dataset

Motif DE_60h DE_60h-KLF13_MA0657.2 17 bp overlap

KLF4 1 dataset

Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap

MAZ 1 dataset

Motif DE_60h DE_60h-MAZ_MA1522.2 8 bp overlap

PATZ1 1 dataset

Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap

PHOX2A 2 datasets

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap

PPARG 1 dataset

ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 157 bp overlap

RELA 1 dataset

Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap

RUNX1 1 dataset

ChIP THP-1 GSE79899.RUNX1.THP-1 185 bp overlap

SATB1 1 dataset

Motif DE_60h DE_60h-SATB1_MA1963.2 7 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 393 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 352 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

SOX12 1 dataset

Motif DE_60h DE_60h-SOX12_MA1561.2 10 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 292 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 357 bp overlap

SP2 2 datasets

Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap

Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap

SPI1 2 datasets

ChIP GM12878 ENCFF134LCP 217 bp overlap

ChIP GM12891 ENCFF563IUT 193 bp overlap

SPIB 2 datasets

Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap

Sox11 1 dataset

Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap

THRA 1 dataset

Motif DE_60h DE_60h-THRA_MA1969.2 18 bp overlap

ZKSCAN5 2 datasets

Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap

Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF148 1 dataset

Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap

ZNF189 1 dataset

Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap

ZNF274 1 dataset

Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap

ZNF281 1 dataset

Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap

ZNF300 1 dataset

ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap

ZNF341 1 dataset

Motif DE_60h DE_60h-ZNF341_MA1655.2 8 bp overlap

ZNF528 1 dataset

Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap

ZNF530 1 dataset

Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap

ZNF701 1 dataset

Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap