chr3 : 10,391,360 10,391,798
438 bp 55 TFs 0 linked genes
This 438 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:10,386,360 – 10,396,798
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP Jurkat GSE97512.ARID5B.Jurkat 236 bp overlap
BCL11A 2 datasets
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 75 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 263 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 346 bp overlap
BRD4 2 datasets
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 70 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 254 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 240 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 313 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 259 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 161 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 261 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 242 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 230 bp overlap
ETS1 4 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 301 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 351 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 438 bp overlap
ChIP THP-6_shEts1 GSE138516.ETS1.THP-6_shEts1 381 bp overlap
FLI1 2 datasets
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 183 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 317 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 309 bp overlap
GATA3 7 datasets
ChIP Jurkat GSE29180.GATA3.Jurkat 397 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 388 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 388 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 299 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 138 bp overlap
ChIP RPMI8402 GSE39179.GATA3.RPMI8402 204 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 155 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 379 bp overlap
ChIP DE DE-GATA4-2 341 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 195 bp overlap
ChIP foregut GSE117136.GATA4.foregut 382 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 238 bp overlap
ChIP DE DE-GATA6-2 356 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 321 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 386 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 438 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 351 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 366 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 155 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 391 bp overlap
ChIP foregut GSE117136.GATA6.foregut 382 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 324 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 166 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 311 bp overlap
JUNB 1 dataset
Motif DE_36h DE_36h-JUNB_MA1140.3 11 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 212 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 238 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 251 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 438 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 194 bp overlap
KLF5 2 datasets
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 371 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 312 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MAZ 2 datasets
Motif DE_36h DE_36h-MAZ_MA1522.2 8 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 178 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 332 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 167 bp overlap
MYC 1 dataset
ChIP Jurkat GSE83777.MYC.Jurkat 287 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 198 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 136 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 220 bp overlap
PATZ1 1 dataset
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
RUNX1 3 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 383 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 303 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 243 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 372 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 313 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 298 bp overlap
SMARCA4 8 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 342 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 373 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 192 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 301 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 362 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 233 bp overlap
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 438 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 282 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 176 bp overlap
SP4 1 dataset
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 244 bp overlap
TAL1 4 datasets
ChIP Jurkat GSE29180.TAL1.Jurkat 213 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 233 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 160 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 293 bp overlap
TCF12 1 dataset
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 255 bp overlap
TCF3 1 dataset
ChIP RPMI8402 GSE39179.TCF3.RPMI8402 206 bp overlap
THRA 1 dataset
Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 210 bp overlap
ChIP K562 ENCFF053XDV 438 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 243 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 146 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 380 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 335 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 387 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 307 bp overlap
ZNF148 1 dataset
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
ZNF682 1 dataset
Motif DE_36h DE_36h-ZNF682_MA1599.2 11 bp overlap
ZNF701 1 dataset
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap