chr2 : 222,311,320 – 222,311,912
592 bp 63 TFs 2 linked genes
This 592 bp open chromatin element is linked to CT75 and ENSG00000288658 and is bound by 63 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CT75 6.4 kb Proximal Proximity
ENSG00000288658 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:222,306,320 – 222,316,912
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 323 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 251 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 207 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 119 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 265 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 181 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 259 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 263 bp overlap
BRD4 3 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 133 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 193 bp overlap
ChIP hESC GSE33281.BRD4.hESC 115 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 257 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 375 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 498 bp overlap
ChIP H1 ENCFF329MAX 298 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 550 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 295 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 474 bp overlap
ESR1 23 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 135 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 243 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 286 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 352 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 350 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 438 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 288 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 329 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 424 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 496 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 425 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 237 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 143 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 184 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 165 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 169 bp overlap
ChIP MCF-7_H3B-5942 GSE115607.ESR1.MCF-7_H3B-5942 199 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 125 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 357 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 224 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 194 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 201 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 163 bp overlap
ESR1_Y537S 1 dataset
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 229 bp overlap
EZH2 26 datasets
ChIP B cell ENCFF803EMO 425 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 517 bp overlap
ChIP GM23248 ENCFF404ZHM 421 bp overlap
ChIP GM23248 ENCFF404ZHM 447 bp overlap
ChIP GM23248 ENCFF404ZHM 244 bp overlap
ChIP GM23248 ENCFF506FWX 344 bp overlap
ChIP GM23338 ENCFF613YON 573 bp overlap
ChIP GM23338 ENCFF613YON 114 bp overlap
ChIP H1 ENCFF232NZA 592 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 519 bp overlap
ChIP HepG2 ENCFF912EIW 212 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 367 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 293 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 252 bp overlap
ChIP SK-N-SH ENCFF657FZK 123 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 592 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 592 bp overlap
ChIP fibroblast of lung ENCFF479BAW 402 bp overlap
ChIP hepatocyte ENCFF118DKH 130 bp overlap
ChIP hepatocyte ENCFF118DKH 97 bp overlap
ChIP hepatocyte ENCFF552DZB 592 bp overlap
ChIP keratinocyte ENCFF070STK 83 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 592 bp overlap
ChIP neural cell ENCFF610EPB 368 bp overlap
ChIP neural progenitor cell ENCFF018MKA 592 bp overlap
ChIP neural progenitor cell ENCFF472NFV 592 bp overlap
EZH2_phosphoT487 2 datasets
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 248 bp overlap
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 178 bp overlap
FOSL2 1 dataset
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 246 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 329 bp overlap
GLIS2 1 dataset
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 133 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 352 bp overlap
IRF4 2 datasets
ChIP T-cell GSE136853.IRF4.T-cell 229 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 259 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 368 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 400 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 592 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 592 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 558 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 592 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 592 bp overlap
JUND 4 datasets
ChIP H1 ENCFF010YXS 281 bp overlap
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 203 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 97 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 292 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 143 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 272 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
NANOG 3 datasets
ChIP WA09 GSE105028.NANOG.WA09 167 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 214 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 216 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 231 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 211 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 142 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 136 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF725QFT 97 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 61 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 279 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 592 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 271 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 88 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 429 bp overlap
RNF2 7 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 279 bp overlap
ChIP H1 ENCFF239FFS 592 bp overlap
ChIP H1 ENCFF239FFS 592 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 592 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 216 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 446 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 317 bp overlap
RXRA 1 dataset
ChIP H1 ENCFF570NHK 183 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 446 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 592 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 310 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 83 bp overlap
SMAD4 1 dataset
ChIP Hep-G2_Ab_R516-1-1G12 GSE97661.SMAD4.Hep-G2_Ab_R516-1-1G12 175 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 592 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 301 bp overlap
SMARCC1 5 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 160 bp overlap
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 215 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 215 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 416 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 592 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 168 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 222 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 243 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 337 bp overlap
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 319 bp overlap
SUZ12 11 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 230 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 380 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 220 bp overlap
ChIP H1 ENCFF881NFR 592 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 395 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 592 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 477 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 592 bp overlap
ChIP NT2/D1 ENCFF574SXS 231 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 425 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 554 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 191 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 255 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 225 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 239 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 59 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 221 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 435 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 363 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 162 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 116 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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