chr2 : 195,442,638 – 195,443,597
959 bp 88 TFs 0 linked genes
This 959 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:195,437,638 – 195,448,597
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
ATF4 4 datasets
Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap
Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap
Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap
Motif DE_72h DE_72h-ATF4_MA0833.3 10 bp overlap
BARX1 4 datasets
Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
Motif DE_72h DE_72h-BARX1_MA0875.2 6 bp overlap
BSX 4 datasets
Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
Motif DE_72h DE_72h-BSX_MA0876.2 6 bp overlap
CEBPG 4 datasets
Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap
Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap
Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap
Motif DE_72h DE_72h-CEBPG_MA1636.2 10 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF346MCV 355 bp overlap
ChIP BLaER1 ENCFF798NMV 251 bp overlap
Crx 2 datasets
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DLX1 4 datasets
Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
Motif DE_72h DE_72h-DLX1_MA0879.3 6 bp overlap
DLX6 4 datasets
Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
Motif DE_72h DE_72h-DLX6_MA0882.2 6 bp overlap
DUXA 4 datasets
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
Dlx3 4 datasets
Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Motif DE_72h DE_72h-Dlx3_MA0880.2 6 bp overlap
Dlx4 4 datasets
Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
Motif DE_72h DE_72h-Dlx4_MA0881.2 6 bp overlap
Dmbx1 2 datasets
Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Dux 4 datasets
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EN2 4 datasets
Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap
Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap
Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap
Motif DE_72h DE_72h-EN2_MA0642.3 7 bp overlap
EOMES 3 datasets
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 207 bp overlap
ESRRA 2 datasets
Motif DE_48h DE_48h-ESRRA_MA0592.4 9 bp overlap
Motif DE_60h DE_60h-ESRRA_MA0592.4 9 bp overlap
ETV5::FIGLA 4 datasets
Motif DE_36h DE_36h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_48h DE_48h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_60h DE_60h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_72h DE_72h-ETV5FIGLA_MA1945.2 14 bp overlap
Esrrg 2 datasets
Motif DE_48h DE_48h-Esrrg_MA0643.2 9 bp overlap
Motif DE_60h DE_60h-Esrrg_MA0643.2 9 bp overlap
FIGLA 4 datasets
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 644 bp overlap
ChIP DE DE-FOXA2-2 598 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 600 bp overlap
ChIP DE DE-GATA4-2 738 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 575 bp overlap
ChIP DE DE-GATA6-2 732 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 337 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 315 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 400 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 294 bp overlap
GBX1 4 datasets
Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap
Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap
Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap
Motif DE_72h DE_72h-GBX1_MA0889.2 7 bp overlap
GBX2 4 datasets
Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
Motif DE_72h DE_72h-GBX2_MA0890.2 6 bp overlap
GSC 2 datasets
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
HESX1 4 datasets
Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
Motif DE_72h DE_72h-HESX1_MA0894.2 6 bp overlap
HOXA7 4 datasets
Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
Motif DE_72h DE_72h-HOXA7_MA1498.3 6 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 183 bp overlap
JUN 4 datasets
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
Motif DE_72h DE_72h-JUN_MA0488.2 10 bp overlap
KLF1 2 datasets
Motif DE_48h DE_48h-KLF1_MA0493.3 8 bp overlap
Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_48h DE_48h-KLF10_MA1511.2 9 bp overlap
Motif DE_60h DE_60h-KLF10_MA1511.2 9 bp overlap
KLF11 2 datasets
Motif DE_48h DE_48h-KLF11_MA1512.2 10 bp overlap
Motif DE_60h DE_60h-KLF11_MA1512.2 10 bp overlap
KLF14 2 datasets
Motif DE_48h DE_48h-KLF14_MA0740.2 9 bp overlap
Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap
KLF2 2 datasets
Motif DE_48h DE_48h-KLF2_MA1515.2 8 bp overlap
Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap
Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap
KLF5 5 datasets
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
KLF9 2 datasets
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
Motif DE_60h DE_60h-KLF9_MA1107.3 11 bp overlap
LBX1 4 datasets
Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap
Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap
Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap
Motif DE_72h DE_72h-LBX1_MA0618.2 7 bp overlap
LBX2 4 datasets
Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
Motif DE_72h DE_72h-LBX2_MA0699.2 6 bp overlap
LHX2 4 datasets
Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
Motif DE_72h DE_72h-LHX2_MA0700.3 6 bp overlap
LHX9 4 datasets
Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap
Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap
Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap
Motif DE_72h DE_72h-LHX9_MA0701.3 7 bp overlap
MEIS1 2 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MSX1 4 datasets
Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
Motif DE_72h DE_72h-MSX1_MA0666.3 6 bp overlap
MSX2 4 datasets
Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
Motif DE_72h DE_72h-MSX2_MA0708.3 6 bp overlap
MZF1 2 datasets
Motif DE_48h DE_48h-MZF1_MA0056.3 8 bp overlap
Motif DE_60h DE_60h-MZF1_MA0056.3 8 bp overlap
Msgn1 2 datasets
Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap
Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap
Msx3 4 datasets
Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
Motif DE_72h DE_72h-Msx3_MA0709.2 6 bp overlap
NR5A1 2 datasets
Motif DE_48h DE_48h-NR5A1_MA1540.3 12 bp overlap
Motif DE_60h DE_60h-NR5A1_MA1540.3 12 bp overlap
Nobox 4 datasets
Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
Motif DE_72h DE_72h-Nobox_MA0125.2 6 bp overlap
Nr5A2 2 datasets
Motif DE_48h DE_48h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_60h DE_60h-Nr5A2_MA0505.3 9 bp overlap
OTX1 2 datasets
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 2 datasets
Motif DE_48h DE_48h-OTX2_MA0712.3 7 bp overlap
Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap
PHOX2A 4 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 4 datasets
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
PITX1 2 datasets
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 2 datasets
Motif DE_48h DE_48h-PITX2_MA1547.2 8 bp overlap
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
POU1F1 2 datasets
Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
POU3F2 2 datasets
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
PRRX2 4 datasets
Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap
Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap
Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap
Motif DE_72h DE_72h-PRRX2_MA0075.4 7 bp overlap
RARA 4 datasets
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
Motif DE_72h DE_72h-RARA_MA0729.1 18 bp overlap
RAX 4 datasets
Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
Motif DE_72h DE_72h-RAX_MA0718.2 6 bp overlap
RHOXF1 2 datasets
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
RORA 4 datasets
Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap
Motif DE_48h DE_48h-RORA_MA0072.2 11 bp overlap
Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap
Motif DE_72h DE_72h-RORA_MA0072.2 11 bp overlap
SATB1 1 dataset
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 441 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 72 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 80 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 295 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 308 bp overlap
SP8 2 datasets
Motif DE_48h DE_48h-SP8_MA0747.2 11 bp overlap
Motif DE_60h DE_60h-SP8_MA0747.2 11 bp overlap
SP9 2 datasets
Motif DE_48h DE_48h-SP9_MA1564.2 10 bp overlap
Motif DE_60h DE_60h-SP9_MA1564.2 10 bp overlap
TBR1 2 datasets
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
TBX18 2 datasets
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX20 2 datasets
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX3 2 datasets
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 139 bp overlap
Tbx6 2 datasets
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
ZEB1 4 datasets
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZNF189 3 datasets
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap
ZNF316 1 dataset
ChIP K-562 ENCSR200JYP.ZNF316.K-562 243 bp overlap
ZNF341 3 datasets
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
Motif DE_60h DE_60h-ZNF341_MA1655.2 8 bp overlap
ZNF490 2 datasets
ChIP HEK293 GSE76494.ZNF490.HEK293 50 bp overlap
ChIP HepG2 ENCFF030RSJ 220 bp overlap
ZNF677 3 datasets
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
ZNF701 2 datasets
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
ZNF740 2 datasets
Motif DE_48h DE_48h-ZNF740_MA0753.3 10 bp overlap
Motif DE_60h DE_60h-ZNF740_MA0753.3 10 bp overlap
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