chr2 : 178,829,370 – 178,829,561
191 bp 46 TFs 2 linked genes
This 191 bp open chromatin element is linked to TTN and RNU7-104P and is bound by 46 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TTN 1.2 kb Proximal Proximity
RNU7-104P 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:178,824,370 – 178,834,561
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
AR 6 datasets
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 134 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 129 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 181 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 173 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 139 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 186 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 190 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 130 bp overlap
BRD4 7 datasets
ChIP HUVEC-C GSE53998.BRD4.HUVEC-C 191 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 191 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 180 bp overlap
ChIP PC-3 GSE137207.BRD4.PC-3 117 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 191 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 144 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 108 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 167 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 116 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 165 bp overlap
CTCF 24 datasets
ChIP RH4 GSE83726.CTCF.RH4 123 bp overlap
ChIP VCaP ENCFF858YQT 191 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 191 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 191 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 153 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 191 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 156 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 180 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 150 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 191 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 191 bp overlap
ChIP heart left ventricle ENCFF888ERQ 191 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 106 bp overlap
ChIP islet ERP004003.CTCF.islet 130 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 154 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 178 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 186 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 171 bp overlap
ChIP spleen ENCFF077XIZ 191 bp overlap
ChIP spleen ENCFF878IYR 191 bp overlap
ChIP spleen ENCFF954DQD 191 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 191 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 191 bp overlap
ChIP spleen ENCSR482PMN.CTCF.spleen 187 bp overlap
EBF3_P177L 1 dataset
ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 90 bp overlap
ERG 32 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 191 bp overlap
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 97 bp overlap
ChIP Jurkat GSE49091.ERG.Jurkat 191 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 90 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 113 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 148 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 137 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 191 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 115 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 150 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 152 bp overlap
ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 191 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 126 bp overlap
ChIP aortic-endothelial-cell_D13 GSE139377.ERG.aortic-endothelial-cell_D13 113 bp overlap
ChIP aortic-endothelial-cell_D14 GSE139377.ERG.aortic-endothelial-cell_D14 140 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 156 bp overlap
ChIP aortic-endothelial-cell_D17 GSE139377.ERG.aortic-endothelial-cell_D17 157 bp overlap
ChIP aortic-endothelial-cell_D19 GSE139377.ERG.aortic-endothelial-cell_D19 169 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 144 bp overlap
ChIP aortic-endothelial-cell_D26 GSE139377.ERG.aortic-endothelial-cell_D26 154 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 123 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 191 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 191 bp overlap
ChIP aortic-endothelial-cell_D4 GSE139377.ERG.aortic-endothelial-cell_D4 138 bp overlap
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 109 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 86 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 191 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 164 bp overlap
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 154 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 142 bp overlap
ChIP aortic-endothelial-cell_D53 GSE139377.ERG.aortic-endothelial-cell_D53 175 bp overlap
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 96 bp overlap
ETS1 3 datasets
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 170 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 139 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 62 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 139 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 123 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 147 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 191 bp overlap
GABPA 3 datasets
ChIP VCaP GSE49091.GABPA.VCaP 155 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 156 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 191 bp overlap
GATA2 7 datasets
ChIP SH-SY5Y ENCFF485YIB 189 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 191 bp overlap
ChIP SK-N-SH ENCFF764OZD 191 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 156 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 67 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 128 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 191 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 186 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 152 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 133 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 191 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 191 bp overlap
GFI1B 3 datasets
ChIP K-562 ENCSR509GDT.GFI1B.K-562 89 bp overlap
ChIP SET-2 GSE121424.GFI1B.SET-2 191 bp overlap
ChIP SET-2_GSK GSE121424.GFI1B.SET-2_GSK 175 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 154 bp overlap
ChIP K562 ENCFF968WBH 191 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR000BMG.HDAC2.K-562 117 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 191 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 191 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 182 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 191 bp overlap
KDM1A 3 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 191 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 191 bp overlap
ChIP SKNO-1_DMSO GSE71739.KDM1A.SKNO-1_DMSO 191 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 110 bp overlap
MED1 2 datasets
ChIP OCI-Ly1 GSE53601.MED1.OCI-Ly1 162 bp overlap
ChIP VCaP GSE148358.MED1.VCaP 124 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 191 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 84 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 130 bp overlap
NR2F2 2 datasets
ChIP liver ENCFF565JGD 191 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 191 bp overlap
NR3C1 1 dataset
ChIP NALM-6 GSE67046.NR3C1.NALM-6 191 bp overlap
PAX5 2 datasets
ChIP NALM-6 GSE126300.PAX5.NALM-6 191 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 191 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 191 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 191 bp overlap
POLR2A 2 datasets
ChIP endothelial cell of umbilical vein ENCFF303XUJ 191 bp overlap
ChIP spleen ENCFF044PYR 191 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 110 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCFF747MAS 148 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 191 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 134 bp overlap
RELA 33 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 132 bp overlap
ChIP HUVEC-C_Scr GSE87552.RELA.HUVEC-C_Scr 151 bp overlap
ChIP HUVEC-C_TNF GSE53998.RELA.HUVEC-C_TNF 191 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 144 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 83 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D24 GSE139377.RELA.aortic-endothelial-cell_IL1B_D24 181 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 163 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 148 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 161 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 114 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 163 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 191 bp overlap
RUNX1 2 datasets
ChIP NALM-6 GSE126300.RUNX1.NALM-6 191 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 60 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 191 bp overlap
SPI1 4 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 110 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 54 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 135 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 114 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 191 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 152 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 191 bp overlap
TFEB 1 dataset
ChIP HUVEC-C GSE88894.TFEB.HUVEC-C 162 bp overlap
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