chr2 : 143,877,070 – 143,877,303

233 bp 59 TFs 0 linked genes

This 233 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

59 transcription factors

AR 1 dataset

ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap

ASXL3 1 dataset

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 226 bp overlap

Ascl2 2 datasets

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 2 datasets

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap

BRD4 2 datasets

ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 233 bp overlap

ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 233 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 175 bp overlap

CBX7 1 dataset

ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 65 bp overlap

CEBPB 1 dataset

ChIP K562 ENCFF584CTB 84 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 223 bp overlap

CHD8 1 dataset

ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 95 bp overlap

CTCF 1 dataset

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 214 bp overlap

Cebpa 4 datasets

ChIP BLaER1 ENCFF093OYK 151 bp overlap

ChIP BLaER1 ENCFF335XTP 233 bp overlap

ChIP BLaER1 ENCFF364PUR 233 bp overlap

ChIP BLaER1 ENCFF858JKM 163 bp overlap

ELF1 1 dataset

ChIP A-549 GSE122203.ELF1.A-549 144 bp overlap

EZH2 1 dataset

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 200 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 220 bp overlap

GATA2 2 datasets

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 167 bp overlap

ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 52 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 233 bp overlap

HAND2 2 datasets

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap

Hic1 2 datasets

Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap

Motif ES_0h ES_0h-Hic1_MA0739.2 8 bp overlap

MAX 2 datasets

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 233 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 233 bp overlap

MED1 1 dataset

ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 184 bp overlap

MYC 4 datasets

ChIP NCI-H128 GSE41105.MYC.NCI-H128 233 bp overlap

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 233 bp overlap

ChIP P493-6_SHTERC GSE60223.MYC.P493-6_SHTERC 52 bp overlap

ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 174 bp overlap

MYCN 1 dataset

ChIP CHP-134 GSE129588.MYCN.CHP-134 233 bp overlap

MYOD1 2 datasets

ChIP RH4 GSE83726.MYOD1.RH4 149 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 122 bp overlap

MYOG 2 datasets

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 225 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 190 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 188 bp overlap

ChIP hESC GSE18292.NANOG.hESC 67 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 206 bp overlap

NEUROG2 5 datasets

ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 111 bp overlap

ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 202 bp overlap

ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 211 bp overlap

ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 142 bp overlap

ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 96 bp overlap

NFIB 2 datasets

Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap

Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap

NFIC 2 datasets

Motif DE_12h DE_12h-NFIC_MA1527.2 15 bp overlap

Motif ES_0h ES_0h-NFIC_MA1527.2 15 bp overlap

NFIC::TLX1 2 datasets

Motif DE_12h DE_12h-NFICTLX1_MA0119.1 14 bp overlap

Motif ES_0h ES_0h-NFICTLX1_MA0119.1 14 bp overlap

NFIX 2 datasets

Motif DE_12h DE_12h-NFIX_MA1528.2 14 bp overlap

Motif ES_0h ES_0h-NFIX_MA1528.2 14 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 233 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap

OSR2 2 datasets

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap

Olig2 2 datasets

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 187 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 195 bp overlap

POU5F1 4 datasets

ChIP BG03 GSE21614.POU5F1.BG03 158 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 233 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 233 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 189 bp overlap

PRDM14 1 dataset

ChIP NCCIT GSE71675.PRDM14.NCCIT 167 bp overlap

RAD21 1 dataset

ChIP IMR-5 GSE78957.RAD21.IMR-5 136 bp overlap

RBBP4 2 datasets

ChIP RH5 GSE155861.RBBP4.RH5 185 bp overlap

ChIP SCMC GSE155861.RBBP4.SCMC 155 bp overlap

RELA 1 dataset

ChIP 786-O GSE86092.RELA.786-O 220 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 232 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 181 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 221 bp overlap

SOX4 1 dataset

ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 124 bp overlap

SP4 1 dataset

ChIP WA01 ENCSR000BQV.SP4.WA01 168 bp overlap

STAT1 1 dataset

ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 172 bp overlap

STAT3 2 datasets

ChIP TMD8 GSE106844.STAT3.TMD8 228 bp overlap

ChIP TMD8_DMSO GSE123398.STAT3.TMD8_DMSO 197 bp overlap

TEAD4 1 dataset

ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 184 bp overlap

TP63 1 dataset

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap

Tcf12 2 datasets

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap

Twist2 2 datasets

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 115 bp overlap

ZEB1 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 197 bp overlap

ZNF549 2 datasets

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap

ZNF76 2 datasets

Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap

Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap

Zfp961 2 datasets

Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap

Motif ES_0h ES_0h-Zfp961_MA2126.1 8 bp overlap

Zfx 2 datasets

Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap

Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap