Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

57 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 379 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 462 bp overlap

CEBPB 1 dataset

ChIP WA01 ENCSR000EBV.CEBPB.WA01 206 bp overlap

CHD7 2 datasets

ChIP H1 ENCFF126NLU 443 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 464 bp overlap

CTCF 1 dataset

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 285 bp overlap

Crx 1 dataset

Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap

EP300 1 dataset

ChIP hESC GSE17917.EP300.hESC 435 bp overlap

FOSL2 1 dataset

Motif ES_0h ES_0h-FOSL2_MA0478.2 10 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 411 bp overlap

ChIP DE DE-FOXA2-2 448 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 405 bp overlap

FOXP4 1 dataset

ChIP WTC11 ENCFF708TAF 356 bp overlap

GSC 1 dataset

Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap

HDAC2 2 datasets

ChIP H1 ENCFF353UJQ 567 bp overlap

ChIP H1 ENCFF353UJQ 248 bp overlap

JUN 4 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 454 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 284 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 452 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 282 bp overlap

KDM1A 3 datasets

ChIP H1 ENCFF696SGD 360 bp overlap

ChIP H1 ENCFF696SGD 50 bp overlap

ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 89 bp overlap

KLF4 2 datasets

ChIP HAP1 GSE130417.KLF4.HAP1 170 bp overlap

ChIP WA09 GSE105028.KLF4.WA09 451 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 140 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 348 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 459 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 567 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 563 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 567 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 539 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 567 bp overlap

ChIP hESC GSE20650.NANOG.hESC 471 bp overlap

ChIP hESC GSE18292.NANOG.hESC 368 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 283 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 242 bp overlap

NIPBL 3 datasets

ChIP WA09 GSE105028.NIPBL.WA09 419 bp overlap

ChIP hESC GSE64758.NIPBL.hESC 199 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 203 bp overlap

Nkx2-1 1 dataset

Motif ES_0h ES_0h-Nkx2-1_MA1994.2 7 bp overlap

OTX1 1 dataset

Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap

PITX1 1 dataset

Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap

PLAG1 1 dataset

Motif ES_0h ES_0h-PLAG1_MA0163.1 14 bp overlap

POU2F1 1 dataset

ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 211 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 107 bp overlap

POU5F1 11 datasets

ChIP GM23338 ENCFF333SNB 196 bp overlap

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP H1 ENCFF698ZAP 157 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 521 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 315 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 96 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 472 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 347 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 374 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 515 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 394 bp overlap

PRDM9 1 dataset

Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap

RAD21 4 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 508 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 503 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 430 bp overlap

ChIP WA09 GSE105028.RAD21.WA09 249 bp overlap

RHOXF1 1 dataset

Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 468 bp overlap

SMAD3 5 datasets

ChIP BG03 GSE21614.SMAD3.BG03 134 bp overlap

ChIP BG03 GSE21614.SMAD3.BG03 144 bp overlap

ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 299 bp overlap

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap

ChIP hESC_DIFF_D0 GSE75297.SMAD3.hESC_DIFF_D0 198 bp overlap

SMARCA4 3 datasets

ChIP WA09 GSE105028.SMARCA4.WA09 345 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 520 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 534 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 452 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 531 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 475 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 550 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 81 bp overlap

ChIP hESC GSE18292.SOX2.hESC 151 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 476 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 412 bp overlap

SP5 1 dataset

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

SUZ12 1 dataset

ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 217 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 443 bp overlap

TEAD4 2 datasets

ChIP ESC S26-ESC-d0-TEAD4-exp1 135 bp overlap

ChIP hESC GSE99202.TEAD4.hESC 310 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 567 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 128 bp overlap

ZNF135 1 dataset

Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap

ZNF143 1 dataset

ChIP WA09 GSE105028.ZNF143.WA09 183 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 422 bp overlap

ZNF213 1 dataset

Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap

ZNF324 1 dataset

Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap

ZNF354C 1 dataset

Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap

ZNF418 1 dataset

Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap

ZNF460 1 dataset

Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap

ZNF462 3 datasets

ChIP GM23338 ENCFF896CCA 121 bp overlap

ChIP GM23338 ENCFF896CCA 89 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 534 bp overlap

Zfp809 1 dataset

Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap

Genome Browser