chr2 : 85,735,752 85,736,182
430 bp 42 TFs 0 linked genes
This 430 bp open chromatin element has no linked target genes and is bound by 42 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:85,730,752 – 85,741,182
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 193 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 430 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 301 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 356 bp overlap
BRD4 2 datasets
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 430 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 186 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 57 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 430 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 192 bp overlap
EP300 1 dataset
ChIP upper lobe of left lung ENCFF024QBJ 240 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D21 GSE139377.ERG.aortic-endothelial-cell_D21 170 bp overlap
FOS 1 dataset
ChIP endothelial cell of umbilical vein ENCFF415XBG 50 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 367 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 229 bp overlap
ChIP DE DE-FOXA2-1 430 bp overlap
ChIP DE DE-FOXA2-2 428 bp overlap
GATA2 3 datasets
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 159 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 422 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 190 bp overlap
GATA3 3 datasets
ChIP BE2C GSE65664.GATA3.BE2C 430 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 162 bp overlap
ChIP SK-N-SH ENCFF040SSB 327 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 381 bp overlap
ChIP DE DE-GATA4-1 430 bp overlap
ChIP DE DE-GATA4-2 430 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 397 bp overlap
ChIP foregut GSE117136.GATA4.foregut 430 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 430 bp overlap
ChIP DE DE-GATA6-2 430 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 310 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 430 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 314 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 319 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 430 bp overlap
ChIP foregut GSE117136.GATA6.foregut 346 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 361 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 430 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 123 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 381 bp overlap
ChIP SK-N-SH ENCFF285GEQ 192 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 258 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 151 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 288 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 287 bp overlap
MED12 1 dataset
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 65 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 430 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 430 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 430 bp overlap
POLR2A 9 datasets
ChIP breast epithelium ENCFF960NNA 324 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 61 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 416 bp overlap
ChIP suprapubic skin ENCFF083NEJ 307 bp overlap
ChIP suprapubic skin ENCFF083NEJ 159 bp overlap
ChIP suprapubic skin ENCFF748PRQ 247 bp overlap
ChIP transverse colon ENCFF610RWV 127 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 281 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 382 bp overlap
RELA 31 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 335 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 254 bp overlap
ChIP HUVEC-C_TNF GSE53998.RELA.HUVEC-C_TNF 249 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 209 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 174 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 197 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 382 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 365 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 326 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 277 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 400 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 328 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 370 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 383 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 245 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 306 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 301 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 264 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 430 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 345 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 387 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 408 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 294 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 311 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 308 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 408 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 430 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 306 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 243 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 370 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 430 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 192 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 106 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 430 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 416 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 430 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 430 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 430 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 209 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 249 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 194 bp overlap
TCF4 2 datasets
ChIP SK-N-SH ENCFF270OWF 335 bp overlap
ChIP SK-N-SH ENCFF270OWF 332 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 430 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 430 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 210 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 224 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 430 bp overlap
ZNF608 1 dataset
ChIP SK-N-SH ENCFF518LYG 267 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCFF468FCG 173 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 114 bp overlap