chr2 : 66,440,816 66,440,992
176 bp 59 TFs 2 linked genes
This 176 bp open chromatin element is linked to MEIS1-AS3 and MEIS1 and is bound by 59 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MEIS1-AS3 7.3 kb Proximal Proximity
MEIS1 7.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:66,435,816 – 66,445,992
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 167 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 159 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 176 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 176 bp overlap
BRD3 4 datasets
ChIP THP-1_DMSO GSE138084.BRD3.THP-1_DMSO 176 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 176 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD3.THP-1_iBET-BD2 176 bp overlap
ChIP U-87MG_GBM_dBET6_2h GSE99171.BRD3.U-87MG_GBM_dBET6_2h 161 bp overlap
BRD4 12 datasets
ChIP BE2C GSE80151.BRD4.BE2C 71 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 176 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 176 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 143 bp overlap
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 142 bp overlap
ChIP SEM GSE83671.BRD4.SEM 176 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 71 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 115 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 176 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 176 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 176 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 124 bp overlap
CDK8 6 datasets
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 176 bp overlap
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 57 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 176 bp overlap
ChIP myometrium_PT848 GSE128230.CDK8.myometrium_PT848 94 bp overlap
ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 95 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 71 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 176 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 148 bp overlap
CHD1 2 datasets
ChIP IMR-90 ENCSR000EFC.CHD1.IMR-90 176 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 117 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 176 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 148 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 126 bp overlap
ESR1 1 dataset
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 63 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 176 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 176 bp overlap
EZH2 11 datasets
ChIP GM23338 ENCFF613YON 176 bp overlap
ChIP GM23338 ENCFF886DXX 85 bp overlap
ChIP H1 ENCFF232NZA 176 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 176 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 176 bp overlap
ChIP astrocyte ENCFF365JTP 176 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 176 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 176 bp overlap
ChIP neural progenitor cell ENCFF018MKA 154 bp overlap
ChIP neural progenitor cell ENCFF472NFV 176 bp overlap
ChIP neural progenitor cell ENCFF472NFV 176 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 176 bp overlap
FOXA2 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 176 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 160 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 176 bp overlap
ChIP DE DE-GATA4-2 176 bp overlap
ChIP G296S GSE85628.GATA4.G296S 176 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 176 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 162 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 176 bp overlap
ChIP foregut GSE117136.GATA4.foregut 176 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 176 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 176 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 176 bp overlap
ChIP DE DE-GATA6-2 176 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 176 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 176 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 176 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 176 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 176 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 176 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 176 bp overlap
ChIP foregut GSE117136.GATA6.foregut 176 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 176 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 176 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 176 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 176 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 176 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 98 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 176 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 176 bp overlap
KMT2A 6 datasets
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 176 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 176 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 176 bp overlap
ChIP L826 GSE83671.KMT2A.L826 176 bp overlap
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 176 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 176 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 176 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 159 bp overlap
MED1 8 datasets
ChIP G296S GSE85628.MED1.G296S 176 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 176 bp overlap
ChIP G296S_4 GSE85628.MED1.G296S_4 176 bp overlap
ChIP MOLM-13 GSE154985.MED1.MOLM-13 138 bp overlap
ChIP MOLM-14 GSE65138.MED1.MOLM-14 176 bp overlap
ChIP MOLM-14_DHE GSE124963.MED1.MOLM-14_DHE 176 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 176 bp overlap
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 176 bp overlap
MED12 4 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 74 bp overlap
ChIP leiomyoma_PT916 GSE128230.MED12.leiomyoma_PT916 74 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 71 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 88 bp overlap
MXI1 1 dataset
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 78 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 176 bp overlap
MYCN 5 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 176 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 97 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 137 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 176 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 172 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 147 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 176 bp overlap
NCAPH2 3 datasets
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 176 bp overlap
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 171 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 176 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 176 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 146 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 174 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 127 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 176 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 176 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 176 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 176 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 176 bp overlap
POLR2A 6 datasets
ChIP adrenal gland ENCFF843OBJ 176 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 137 bp overlap
ChIP sigmoid colon ENCFF101ILL 100 bp overlap
ChIP sigmoid colon ENCFF748YVT 92 bp overlap
ChIP transverse colon ENCFF607LKE 115 bp overlap
ChIP transverse colon ENCFF607LKE 176 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 97 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 150 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 176 bp overlap
RAD21 2 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 83 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 176 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 176 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 167 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 176 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 176 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 144 bp overlap
SMARCA4 5 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 176 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 176 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 176 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 176 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 107 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 176 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 59 bp overlap
SMC1 2 datasets
ChIP IMR-90_G GSE118494.SMC1.IMR-90_G 139 bp overlap
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 108 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 86 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 176 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 121 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 152 bp overlap
SUZ12 3 datasets
ChIP H1 ENCFF881NFR 176 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 176 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 162 bp overlap
TBX5 4 datasets
ChIP G296S GSE85628.TBX5.G296S 176 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 176 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 77 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 176 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 176 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 118 bp overlap