chr2 : 58,155,225 58,155,890
665 bp 66 TFs 0 linked genes
This 665 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:58,150,225 – 58,160,890
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 114 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 172 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 120 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 253 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 210 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 168 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 187 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 281 bp overlap
FEZF2 1 dataset
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FOSL2 1 dataset
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 119 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 497 bp overlap
ChIP DE DE-FOXA2-2 507 bp overlap
FOXO6 1 dataset
Motif DE_36h DE_36h-FOXO6_MA0849.1 7 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 333 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 313 bp overlap
ChIP DE DE-GATA6-2 317 bp overlap
GTF2F1 1 dataset
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 158 bp overlap
HNRNPK 3 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 262 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 237 bp overlap
ChIP HepG2 ENCFF493GNS 451 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 390 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 315 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 245 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 236 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MPHOSPH8 2 datasets
ChIP H9 GSE95374.MPHOSPH8.H9 105 bp overlap
ChIP H9 GSE95374.MPHOSPH8.H9 188 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 182 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 241 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 209 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 197 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHG.NR3C1.A-549 223 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 190 bp overlap
PAF1 2 datasets
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 235 bp overlap
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 67 bp overlap
POLR2A 4 datasets
ChIP H1 ENCFF833NJP 202 bp overlap
ChIP HepG2 ENCFF718XAJ 421 bp overlap
ChIP HepG2 ENCFF718XAJ 405 bp overlap
ChIP HepG2 ENCFF736SLT 326 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 261 bp overlap
ChIP HepG2 ENCFF508UTS 257 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 146 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 376 bp overlap
Prdm14 1 dataset
Motif DE_36h DE_36h-Prdm14_MA1998.2 8 bp overlap
RBM22 4 datasets
ChIP HepG2 ENCFF292RVQ 210 bp overlap
ChIP HepG2 ENCFF292RVQ 230 bp overlap
ChIP HepG2 ENCFF561IAJ 250 bp overlap
ChIP HepG2 ENCFF561IAJ 465 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 314 bp overlap
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 301 bp overlap
Rarg 1 dataset
Motif DE_36h DE_36h-Rarg_MA0860.1 17 bp overlap
SETX 1 dataset
ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 173 bp overlap
SMAD2-3 2 datasets
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 400 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 95 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 271 bp overlap
SNAI2 2 datasets
ChIP RD GSE137168.SNAI2.RD 219 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 374 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 378 bp overlap
SUPT5H 3 datasets
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 221 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 301 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 104 bp overlap
Six3 1 dataset
Motif DE_36h DE_36h-Six3_MA0631.2 11 bp overlap
Spz1 1 dataset
Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 152 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 152 bp overlap
Thap11 1 dataset
Motif DE_36h DE_36h-Thap11_MA1573.2 14 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 344 bp overlap
ZIM3 1 dataset
ChIP HEK293 GSE76494.ZIM3.HEK293 142 bp overlap
ZNF143 4 datasets
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 156 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 234 bp overlap
ChIP K-562 GSE39263.ZNF143.K-562 193 bp overlap
ZNF148 1 dataset
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
ZNF282 1 dataset
Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 227 bp overlap
ZNF76 1 dataset
Motif DE_36h DE_36h-ZNF76_MA1716.2 17 bp overlap
ZNF777 1 dataset
ChIP HEK293T GSE78099.ZNF777.HEK293T 95 bp overlap
ZNF784 1 dataset
Motif DE_36h DE_36h-ZNF784_MA1717.2 8 bp overlap
ZNF816 1 dataset
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap
ZSCAN29 1 dataset
Motif DE_36h DE_36h-ZSCAN29_MA1602.2 11 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap