chr2 : 38,155,925 38,156,265
340 bp 104 TFs 0 linked genes
This 340 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:38,150,925 – 38,161,265
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_72h DE_72h-ALX3_MA0634.2 6 bp overlap
AR 16 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 298 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 176 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 183 bp overlap
ChIP VCaP GSE148358.AR.VCaP 231 bp overlap
ChIP VCaP GSE32892.AR.VCaP 199 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 323 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 94 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 208 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 165 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 209 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 138 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 137 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 203 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 280 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 297 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 81 bp overlap
ARGFX 1 dataset
Motif DE_72h DE_72h-ARGFX_MA1463.2 8 bp overlap
Arid3a 1 dataset
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 328 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 171 bp overlap
BRD4 2 datasets
ChIP VCaP GSE148358.BRD4.VCaP 336 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 231 bp overlap
DPRX 3 datasets
Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
DRGX 1 dataset
Motif DE_72h DE_72h-DRGX_MA1481.2 6 bp overlap
DUX4 3 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EMX1 1 dataset
Motif DE_72h DE_72h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_72h DE_72h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_72h DE_72h-EN1_MA0027.3 6 bp overlap
ERG 6 datasets
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 240 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 240 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 158 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 340 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 155 bp overlap
ESX1 1 dataset
Motif DE_72h DE_72h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_72h DE_72h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_72h DE_72h-EVX2_MA0888.2 6 bp overlap
FOXA1 2 datasets
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 262 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 340 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 340 bp overlap
ChIP DE DE-FOXA2-2 340 bp overlap
Motif DE_72h DE_72h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_72h DE_72h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_72h DE_72h-FOXB1_MA0845.1 11 bp overlap
FOXI1 1 dataset
Motif DE_72h DE_72h-FOXI1_MA0042.2 7 bp overlap
FOXP1 1 dataset
Motif DE_72h DE_72h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_72h DE_72h-FOXP2_MA0593.2 9 bp overlap
FOXP4 1 dataset
Motif DE_72h DE_72h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_72h DE_72h-FOXS1_MA2118.1 8 bp overlap
Foxl2 1 dataset
Motif DE_72h DE_72h-Foxl2_MA1607.2 10 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 146 bp overlap
GATA2 6 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 145 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 145 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 179 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 149 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 272 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 266 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 137 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 340 bp overlap
ChIP DE DE-GATA4-2 340 bp overlap
ChIP foregut GSE117136.GATA4.foregut 340 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 340 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 340 bp overlap
ChIP DE DE-GATA6-2 340 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 260 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 338 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 340 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 340 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 316 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 306 bp overlap
ChIP foregut GSE117136.GATA6.foregut 340 bp overlap
GSX1 1 dataset
Motif DE_72h DE_72h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_72h DE_72h-GSX2_MA0893.3 7 bp overlap
HAND2 1 dataset
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HOXA1 1 dataset
Motif DE_72h DE_72h-HOXA1_MA1495.2 6 bp overlap
HOXA10 1 dataset
Motif DE_72h DE_72h-HOXA10_MA0899.2 9 bp overlap
HOXA2 1 dataset
Motif DE_72h DE_72h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_72h DE_72h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_72h DE_72h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_72h DE_72h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_72h DE_72h-HOXB1_MA2093.1 7 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 61 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 136 bp overlap
HOXB2 1 dataset
Motif DE_72h DE_72h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_72h DE_72h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_72h DE_72h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_72h DE_72h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_72h DE_72h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_72h DE_72h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_72h DE_72h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_72h DE_72h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_72h DE_72h-HOXD8_MA0910.3 7 bp overlap
HOXD9 1 dataset
Motif DE_72h DE_72h-HOXD9_MA0913.3 9 bp overlap
ISX 1 dataset
Motif DE_72h DE_72h-ISX_MA0654.2 6 bp overlap
LHX5 1 dataset
Motif DE_72h DE_72h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
LMX1A 1 dataset
Motif DE_72h DE_72h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_72h DE_72h-LMX1B_MA0703.3 8 bp overlap
Lhx4 1 dataset
Motif DE_72h DE_72h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_72h DE_72h-Lhx8_MA0705.2 6 bp overlap
MED1 2 datasets
ChIP VCaP GSE148358.MED1.VCaP 73 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 183 bp overlap
MEOX1 1 dataset
Motif DE_72h DE_72h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_72h DE_72h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_72h DE_72h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_72h DE_72h-MNX1_MA0707.3 6 bp overlap
Mecom 3 datasets
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NFATC3 1 dataset
Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap
NKX6-1 1 dataset
Motif DE_72h DE_72h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 1 dataset
Motif DE_72h DE_72h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_72h DE_72h-NOTO_MA0710.2 7 bp overlap
NR1D2 1 dataset
Motif DE_72h DE_72h-NR1D2_MA1532.2 15 bp overlap
Nfatc1 1 dataset
Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap
PDX1 1 dataset
Motif DE_72h DE_72h-PDX1_MA0132.3 6 bp overlap
PHOX2A 1 dataset
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
POU6F1 1 dataset
Motif DE_72h DE_72h-POU6F1_MA0628.2 6 bp overlap
PPARG 1 dataset
Motif DE_72h DE_72h-PPARG_MA0066.2 19 bp overlap
PRDM9 1 dataset
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
PRRX1 1 dataset
Motif DE_72h DE_72h-PRRX1_MA0716.2 6 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1618.2 9 bp overlap
RAX2 1 dataset
Motif DE_72h DE_72h-RAX2_MA0717.2 6 bp overlap
SHOX 1 dataset
Motif DE_72h DE_72h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 313 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 340 bp overlap
Shox2 1 dataset
Motif DE_72h DE_72h-Shox2_MA0720.2 6 bp overlap
TERF2 1 dataset
ChIP smooth-muscle-cell_iciHHV6 GSE121985.TERF2.smooth-muscle-cell_iciHHV6 162 bp overlap
TGIF1 1 dataset
Motif DE_72h DE_72h-TGIF1_MA0796.1 12 bp overlap
TLX2 1 dataset
Motif DE_72h DE_72h-TLX2_MA1577.2 6 bp overlap
TWIST1 1 dataset
Motif DE_72h DE_72h-TWIST1_MA1123.3 8 bp overlap
Thap11 1 dataset
Motif DE_72h DE_72h-Thap11_MA1573.2 14 bp overlap
UNCX 1 dataset
Motif DE_72h DE_72h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_72h DE_72h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_72h DE_72h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_72h DE_72h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_72h DE_72h-VSX2_MA0726.2 7 bp overlap
ZBTB18 1 dataset
Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap
ZNF257 1 dataset
Motif DE_72h DE_72h-ZNF257_MA1710.2 10 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
mix-a 1 dataset
Motif DE_72h DE_72h-mix-a_MA0621.2 7 bp overlap