Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

49 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 293 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 111 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 381 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 200 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 304 bp overlap

ChIP DE DE-FOXA2-2 276 bp overlap

FOXH1 1 dataset

Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap

GATA1 1 dataset

ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 68 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 288 bp overlap

ChIP DE DE-GATA4-2 470 bp overlap

GATA6 2 datasets

ChIP DE DE-GATA6-2 450 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 320 bp overlap

HOXB4 1 dataset

Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap

HOXC13 3 datasets

Motif DE_24h DE_24h-HOXC13_MA0907.2 9 bp overlap

Motif DE_48h DE_48h-HOXC13_MA0907.2 9 bp overlap

Motif DE_60h DE_60h-HOXC13_MA0907.2 9 bp overlap

HOXC4 1 dataset

Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap

HOXD3 1 dataset

Motif DE_48h DE_48h-HOXD3_MA0912.2 8 bp overlap

HOXD4 1 dataset

Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 297 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 568 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 597 bp overlap

LDB1 1 dataset

ChIP HEP GSE52637.LDB1.HEP 109 bp overlap

MEIS1 1 dataset

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 88 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 289 bp overlap

POLR2A 1 dataset

ChIP H1 ENCFF566JSR 556 bp overlap

POU5F1 2 datasets

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 119 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 66 bp overlap

POU6F1 1 dataset

Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap

POU6F2 1 dataset

Motif DE_48h DE_48h-POU6F2_MA0793.2 9 bp overlap

PRDM1 2 datasets

Motif DE_24h DE_24h-PRDM1_MA0508.4 7 bp overlap

Motif DE_48h DE_48h-PRDM1_MA0508.4 7 bp overlap

PRDM10 3 datasets

ChIP HEK293 ENCFF145WQQ 454 bp overlap

ChIP K-562 ENCSR120MPG.PRDM10.K-562 250 bp overlap

ChIP K562 ENCFF740YLK 135 bp overlap

Rarg 1 dataset

Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap

SMAD2 3 datasets

ChIP endoderm GSE29422.SMAD2.endoderm 220 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 470 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 377 bp overlap

SMAD2-3 4 datasets

ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 120 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 597 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 597 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 597 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 597 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 597 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 597 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 597 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 597 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 205 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 281 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 186 bp overlap

SREBF1 2 datasets

Motif DE_48h DE_48h-SREBF1_MA0595.1 10 bp overlap

Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap

SREBF2 1 dataset

Motif DE_48h DE_48h-SREBF2_MA0596.1 10 bp overlap

SRF 4 datasets

Motif DE_24h DE_24h-SRF_MA0083.3 16 bp overlap

Motif DE_48h DE_48h-SRF_MA0083.3 16 bp overlap

ChIP H1 ENCFF036PEF 225 bp overlap

ChIP WA01 ENCSR000BIV.SRF.WA01 187 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 390 bp overlap

ChIP H1 ENCFF478SZO 476 bp overlap

TAL1 1 dataset

ChIP PRIMA5 GSE33850.TAL1.PRIMA5 79 bp overlap

TBP 1 dataset

ChIP hESC GSE122298.TBP.hESC 190 bp overlap

TP53 2 datasets

ChIP H9 GSE142050.TP53.H9 296 bp overlap

ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 292 bp overlap

Wt1 1 dataset

Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap

ZFP14 1 dataset

Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 85 bp overlap

ZNF22 1 dataset

ChIP HEK293 GSE76494.ZNF22.HEK293 97 bp overlap

ZNF35 1 dataset

Motif DE_24h DE_24h-ZNF35_MA2333.1 7 bp overlap

ZNF354C 1 dataset

Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap

ZNF530 2 datasets

Motif DE_24h DE_24h-ZNF530_MA1981.2 14 bp overlap

Motif DE_48h DE_48h-ZNF530_MA1981.2 14 bp overlap

ZNF675 1 dataset

Motif DE_24h DE_24h-ZNF675_MA1714.2 19 bp overlap

ZNF768 2 datasets

Motif DE_24h DE_24h-ZNF768_MA1731.2 9 bp overlap

Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap

ZNF8 1 dataset

Motif DE_24h DE_24h-ZNF8_MA1718.1 20 bp overlap

Zfp335 2 datasets

Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap

Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap

Gene	Dist. to TSS	Distance	Link type
WNK3	30.4 kb	Distal	Multiome
TSR2	52.0 kb	Distal	Multiome
FGD1	107.9 kb	Distal	Multiome
GNL3L	141.9 kb	Distal	Multiome
FAM120C	205.1 kb	Distal	Multiome

Genome Browser