chr22:39,087,857–39,088,400

chr22 : 39,087,857 – 39,088,400

543 bp 32 TFs 12 linked genes

This 543 bp open chromatin element is linked to 12 target genes and is bound by 32 transcription factors.

Linked Genes

12 genes

Gene	Expression	Dist. to TSS	Distance	Link type
APOBEC3H		8.8 kb	Proximal	Proximity
APOBEC3G		10.8 kb	Distal	Multiome
APOBEC3F		47.2 kb	Distal	Multiome
CBX7		64.5 kb	Distal	Multiome
APOBEC3D		66.9 kb	Distal	Multiome
APOBEC3C		73.8 kb	Distal	Multiome
PDGFB		155.0 kb	Distal	Multiome
CBX6		215.8 kb	Distal	Multiome
RPL3		231.5 kb	Distal	Multiome
SYNGR1		261.9 kb	Distal	Multiome
DNAL4		293.9 kb	Distal	Multiome
SUN2		293.9 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

32 transcription factors

ChIP K562 ENCFF025NLP 487 bp overlap

ChIP GM12878 ENCFF391UGE 78 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 300 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCFF299RSE 335 bp overlap

GLIS2 1 dataset

ChIP HEK293 ENCFF446EIF 470 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 385 bp overlap

ChIP H1 ENCFF914VQY 357 bp overlap

ChIP HepG2 ENCFF507HCX 533 bp overlap

ChIP HepG2 ENCFF507HCX 419 bp overlap

ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 108 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 367 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 306 bp overlap

ChIP WTC11 ENCFF223QFY 543 bp overlap

ChIP HEK293 ENCFF994GSG 538 bp overlap

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 263 bp overlap

ChIP Kelly GSE94782.MYCN.Kelly 193 bp overlap

MYOD1 1 dataset

ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 229 bp overlap

POLR2A 8 datasets

ChIP GM12878 ENCFF521FXC 279 bp overlap

ChIP GM12878 ENCFF631ERR 426 bp overlap

ChIP GM12892 ENCFF506PGQ 462 bp overlap

ChIP GM12892 ENCFF542ZFO 427 bp overlap

ChIP GM18526 ENCFF599EPS 431 bp overlap

ChIP GM18951 ENCFF079KKO 480 bp overlap

ChIP GM23338 ENCFF450WCS 171 bp overlap

ChIP spleen ENCFF706IUS 273 bp overlap

POLR2G 1 dataset

ChIP K562 ENCFF047BLG 296 bp overlap

POU2F2 1 dataset

ChIP GM12891 ENCFF166YPP 311 bp overlap

ChIP HEK293 GSE76494.SP1.HEK293 246 bp overlap

ChIP HEK293 ENCFF181QXT 191 bp overlap

ChIP HEK293 GSE76494.SP4.HEK293 229 bp overlap

ChIP GM12878 ENCSR000BQT.TCF3.GM12878 74 bp overlap

ChIP WTC11 ENCFF139JAW 417 bp overlap

ZBED1 1 dataset

ChIP GM12878 ENCFF007OSW 217 bp overlap

ZBTB12 1 dataset

ChIP HEK293 ENCFF963HPT 331 bp overlap

ZBTB17 1 dataset

ChIP HEK293 ENCFF865LIO 538 bp overlap

ZBTB20 1 dataset

ChIP HEK293 ENCFF524ADK 472 bp overlap

ZBTB21 1 dataset

ChIP WTC11 ENCFF677ZYY 401 bp overlap

ZBTB48 1 dataset

ChIP HEK293 ENCFF809BPK 465 bp overlap

ZBTB8A 1 dataset

ChIP HEK293 ENCFF303WRD 502 bp overlap

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 316 bp overlap

ChIP HEK293 ENCFF033NQQ 445 bp overlap

ZNF341 1 dataset

ChIP HEK293 ENCFF944VMC 471 bp overlap

ZNF449 1 dataset

ChIP HEK293 ENCFF764ZIC 372 bp overlap

ZNF646 1 dataset

ChIP HepG2 ENCFF141MBP 101 bp overlap

ZNF768 1 dataset

ChIP HepG2 ENCFF388QCK 423 bp overlap