Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

42 transcription factors

ATF2 1 dataset

ChIP H1 ENCFF295GZO 374 bp overlap

BCL11A 2 datasets

ChIP WA01 ENCSR000BMJ.BCL11A.WA01 124 bp overlap

ChIP WA01 ENCSR000BIP.BCL11A.WA01 142 bp overlap

BRD4 1 dataset

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 349 bp overlap

CHD7 1 dataset

ChIP H1 ENCFF126NLU 308 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 365 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 253 bp overlap

CTCF 1 dataset

ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 77 bp overlap

EP300 2 datasets

ChIP H1 ENCFF927IYK 206 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 144 bp overlap

ESR1 2 datasets

ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 212 bp overlap

ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 181 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF018MKA 498 bp overlap

FLI1 2 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 201 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 162 bp overlap

FOS 1 dataset

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 504 bp overlap

FOXA1 7 datasets

ChIP LS180 GSE140533.FOXA1.LS180 62 bp overlap

ChIP breast-cancer_Herceptin-ICI GSE101407.FOXA1.breast-cancer_Herceptin-ICI 193 bp overlap

ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 457 bp overlap

ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 276 bp overlap

ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 164 bp overlap

ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 177 bp overlap

ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 163 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 299 bp overlap

ChIP DE DE-FOXA2-2 299 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 172 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 339 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 246 bp overlap

JUN 5 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 256 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 452 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 253 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 198 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 402 bp overlap

MAX 1 dataset

ChIP H1 ENCFF914VQY 294 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 206 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 140 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 175 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 154 bp overlap

ChIP H1 ENCFF747ZPQ 198 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 334 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 204 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 163 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 504 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 229 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 223 bp overlap

ChIP hESC GSE18292.NANOG.hESC 150 bp overlap

NEUROD1 4 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 238 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 266 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 127 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 130 bp overlap

OTX2 1 dataset

ChIP WTC11 ENCFF634NAO 198 bp overlap

POLR2A 1 dataset

ChIP HepG2 ENCFF422YUC 315 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 260 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 206 bp overlap

PRDM6 1 dataset

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 179 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 276 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 384 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 287 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 333 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 292 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 411 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 329 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 504 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 145 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 200 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 249 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 75 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 215 bp overlap

SP1 2 datasets

ChIP H1 ENCFF263FUH 220 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 164 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 157 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 144 bp overlap

TEAD1 1 dataset

ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap

TEAD4 2 datasets

ChIP ESC S26-ESC-d0-TEAD4-exp1 419 bp overlap

ChIP H1 ENCFF778PAX 245 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 233 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 195 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 130 bp overlap

ZNF677 1 dataset

ChIP HEK293 ENCSR279KDC.ZNF677.HEK293 141 bp overlap

Gene	Dist. to TSS	Distance	Link type
ADNP2	9.9 kb	Proximal	Proximity
PARD6G-AS1	28.5 kb	Distal	Multiome
RBFADN	72.5 kb	Distal	Multiome
RBFA	85.0 kb	Distal	Multiome
TXNL4A	85.4 kb	Distal	Multiome
PARD6G	128.1 kb	Distal	Multiome
HSBP1L1	154.8 kb	Distal	Multiome
SLC66A2	167.7 kb	Distal	Multiome

Genome Browser