chr18 : 31,688,746 – 31,688,908
162 bp 43 TFs 2 linked genes
This 162 bp open chromatin element is linked to B4GALT6 and ENSG00000259985 and is bound by 43 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
B4GALT6 2.9 kb Proximal Proximity
ENSG00000259985 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:31,683,746 – 31,693,908
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 5 datasets
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 137 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 162 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 149 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 157 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 136 bp overlap
BCL11A 1 dataset
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 86 bp overlap
CDK7 1 dataset
ChIP Jurkat GSE83777.CDK7.Jurkat 152 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 162 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 162 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 146 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 162 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 105 bp overlap
ETS1 3 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 162 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 162 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 162 bp overlap
EZH2 1 dataset
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 162 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 83 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 162 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 162 bp overlap
GATA1 11 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 118 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 134 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 147 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 110 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 162 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 162 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 162 bp overlap
ChIP erythroblast ENCFF867JAR 162 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 162 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 162 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 162 bp overlap
GATA2 12 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 119 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 162 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 162 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 162 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 162 bp overlap
ChIP SH-SY5Y ENCFF485YIB 162 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 162 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 162 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 162 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 162 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 162 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 145 bp overlap
GATA3 10 datasets
ChIP CCRF-CEM GSE33850.GATA3.CCRF-CEM 79 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 162 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 162 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 162 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 162 bp overlap
ChIP MCF-7 GSE117492.GATA3.MCF-7 125 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 162 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 162 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 162 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 162 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 162 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 162 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 162 bp overlap
ChIP DE DE-GATA4-2 162 bp overlap
ChIP foregut GSE117136.GATA4.foregut 162 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 151 bp overlap
ChIP DE DE-GATA6-2 162 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 162 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 162 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 144 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 162 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 162 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 162 bp overlap
ChIP foregut GSE117136.GATA6.foregut 162 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 162 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 131 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 162 bp overlap
LMO2 2 datasets
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 155 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 162 bp overlap
LYL1 1 dataset
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 150 bp overlap
MYB 5 datasets
ChIP DU528 GSE94000.MYB.DU528 162 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 162 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 162 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 154 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 162 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 157 bp overlap
NOTCH1 1 dataset
ChIP THP-6_shCtrl GSE138516.NOTCH1.THP-6_shCtrl 162 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 138 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 82 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 110 bp overlap
PPARG 1 dataset
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 149 bp overlap
RELA 1 dataset
ChIP HeLa-B2_TA_TNFA GSE24518.RELA.HeLa-B2_TA_TNFA 140 bp overlap
RUNX1 7 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 162 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 162 bp overlap
ChIP Jurkat GSE29180.RUNX1.Jurkat 138 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 162 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 162 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 151 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 116 bp overlap
RUNX2 2 datasets
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 153 bp overlap
ChIP PER-117 GSE151819.RUNX2.PER-117 162 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 162 bp overlap
ChIP HGrC1_C134W-TGF_SMAD4-KO GSE138496.SMAD2-3.HGrC1_C134W-TGF_SMAD4-KO 147 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD2-3.HGrC1_C134W-TGF_parental 129 bp overlap
SMAD4 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 162 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 90 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 162 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 162 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 162 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 162 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 162 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 162 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 128 bp overlap
SPI1 4 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 102 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 159 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 143 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 106 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 134 bp overlap
TAL1 11 datasets
ChIP CCRF-CEM GSE33850.TAL1.CCRF-CEM 162 bp overlap
ChIP CD34 GSE52924.TAL1.CD34 162 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 113 bp overlap
ChIP Jurkat GSE29180.TAL1.Jurkat 162 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 142 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 162 bp overlap
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 162 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 162 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 140 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 162 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 139 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 162 bp overlap
TCF7L2 1 dataset
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 50 bp overlap
TEAD1 1 dataset
ChIP MSTO GSE68170.TEAD1.MSTO 63 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 144 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 162 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 162 bp overlap
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