chr18 : 11,902,776 11,903,138
362 bp 55 TFs 2 linked genes
This 362 bp open chromatin element is linked to MPPE1 and ENSG00000273141 and is bound by 55 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MPPE1 5.2 kb Proximal Proximity
ENSG00000273141 5.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:11,897,776 – 11,908,138
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 129 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 236 bp overlap
ChIP K562 ENCFF673OEZ 362 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 271 bp overlap
CTCF 1 dataset
ChIP U-937 ERP008568.CTCF.U-937 245 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 152 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 180 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 252 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 226 bp overlap
ETS1 2 datasets
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 234 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 64 bp overlap
FOS 1 dataset
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 95 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 362 bp overlap
ChIP DE DE-FOXA2-2 362 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 187 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 185 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 218 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 362 bp overlap
ChIP DE DE-GATA4-2 362 bp overlap
ChIP foregut GSE117136.GATA4.foregut 353 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 362 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 362 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 362 bp overlap
ChIP DE DE-GATA6-2 362 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 362 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 362 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 357 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 362 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 362 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 362 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 226 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 362 bp overlap
ChIP foregut GSE117136.GATA6.foregut 362 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 362 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 362 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 298 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 362 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 239 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 362 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 173 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 177 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 81 bp overlap
KDM1A 2 datasets
ChIP K-562 GSE117944.KDM1A.K-562 163 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 199 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 205 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 175 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 109 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 100 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 127 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 61 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 230 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 157 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 172 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 89 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 309 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 117 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 155 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 348 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 164 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 107 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 333 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 194 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 362 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 148 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 214 bp overlap
TAL1 4 datasets
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 166 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 181 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 164 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 177 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 265 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 207 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 147 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 128 bp overlap
ChIP WTC11 ENCFF699QGS 256 bp overlap
USF2 2 datasets
ChIP WA01 ENCSR000ECD.USF2.WA01 86 bp overlap
ChIP WTC11 ENCFF139JAW 252 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 226 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 190 bp overlap
ZEB2 3 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 298 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 194 bp overlap
ChIP K562 ENCFF795CMH 335 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 335 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 302 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 313 bp overlap
ZSCAN29 2 datasets
ChIP K-562 ENCSR175SZH.ZSCAN29.K-562 362 bp overlap
ChIP K562 ENCFF797SOU 359 bp overlap