chr1 : 242,025,312 242,025,971
659 bp 44 TFs 0 linked genes
This 659 bp open chromatin element has no linked target genes and is bound by 44 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:242,020,312 – 242,030,971
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE43720.AR.LNCaP 218 bp overlap
ATF3 4 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 175 bp overlap
ChIP K-562 ENCSR632DCH.ATF3.K-562 75 bp overlap
ChIP K562 ENCFF604FPV 112 bp overlap
ChIP K562 ENCFF921JQW 262 bp overlap
ATF4 3 datasets
ChIP HepG2 ENCFF903ADR 181 bp overlap
ChIP K-562 ENCSR145TSJ.ATF4.K-562 208 bp overlap
ChIP K562 ENCFF674KTF 146 bp overlap
BRD4 3 datasets
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 126 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 114 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 197 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 85 bp overlap
CEBPA 1 dataset
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 64 bp overlap
CEBPB 8 datasets
ChIP H1 ENCFF871PTR 125 bp overlap
ChIP HepG2 ENCFF536NTI 96 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 142 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 72 bp overlap
ChIP K562 ENCFF189VBN 102 bp overlap
ChIP K562 ENCFF194QGF 159 bp overlap
ChIP K562 ENCFF584CTB 260 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 152 bp overlap
CEBPG 4 datasets
ChIP HepG2 ENCFF503XBC 137 bp overlap
ChIP K-562 ENCSR620VIC.CEBPG.K-562 143 bp overlap
ChIP K562 ENCFF651CMK 186 bp overlap
ChIP K562 ENCFF783ADE 251 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 189 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 160 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 126 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 53 bp overlap
ChIP BLaER1 ENCFF364PUR 113 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 314 bp overlap
E2F1 1 dataset
ChIP K562 ENCFF163BSY 305 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000EWJ.E2F6.K-562 101 bp overlap
E2F8 2 datasets
ChIP K-562 ENCSR953DVM.E2F8.K-562 93 bp overlap
ChIP K562 ENCFF985IKY 70 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 133 bp overlap
ETV4 1 dataset
ChIP Hep-G2 ENCSR714YZG.ETV4.Hep-G2 71 bp overlap
GABPB1 1 dataset
ChIP WTC11 ENCFF166QKI 189 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 367 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 269 bp overlap
ChIP DE DE-GATA6-2 309 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 337 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 354 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 432 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 345 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 519 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 311 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 59 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 305 bp overlap
ChIP K562 ENCFF320EQC 173 bp overlap
LEF1 1 dataset
ChIP K-562 ENCSR832OGB.LEF1.K-562 72 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 103 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 153 bp overlap
ChIP K562 ENCFF140CEX 249 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 99 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 280 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 172 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 184 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 312 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 284 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 246 bp overlap
ChIP K562 ENCFF967GRF 534 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR138FUZ.RNF2.K-562 84 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 641 bp overlap
SOX2 5 datasets
ChIP HNSC GSE69479.SOX2.HNSC 436 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 273 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 167 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 272 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 185 bp overlap
TFDP1 1 dataset
ChIP HepG2 ENCFF717XKC 185 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 112 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 283 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 153 bp overlap