chr16 : 27,324,934 27,325,355
421 bp 64 TFs 0 linked genes
This 421 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:27,319,934 – 27,330,355
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 107 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 138 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 250 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 240 bp overlap
BRD4 3 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 323 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 283 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 335 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 256 bp overlap
ChIP keratinocyte_CTR GSE139685.CHD4.keratinocyte_CTR 297 bp overlap
E2F6 1 dataset
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
ESR1 2 datasets
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 148 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 207 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
GABPA 1 dataset
ChIP HepG2 ENCFF467OEO 293 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 76 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 251 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 163 bp overlap
HES4 1 dataset
ChIP HepG2 ENCFF200ZII 85 bp overlap
HNRNPL 1 dataset
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 243 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 79 bp overlap
KDM1A 4 datasets
ChIP H1 ENCFF696SGD 421 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 213 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 247 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 322 bp overlap
KLF1 1 dataset
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_24h DE_24h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_24h DE_24h-KLF3_MA1516.2 10 bp overlap
KLF4 1 dataset
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 89 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 336 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 204 bp overlap
MNX1 1 dataset
ChIP HepG2 ENCFF938KYA 171 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 336 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 332 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 262 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 253 bp overlap
POLR2A 17 datasets
ChIP esophagus muscularis mucosa ENCFF432ZCY 417 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 216 bp overlap
ChIP esophagus muscularis mucosa ENCFF617PTB 301 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 377 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 405 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 249 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 130 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 387 bp overlap
ChIP sigmoid colon ENCFF101ILL 224 bp overlap
ChIP sigmoid colon ENCFF653CQA 414 bp overlap
ChIP sigmoid colon ENCFF653CQA 233 bp overlap
ChIP sigmoid colon ENCFF748YVT 421 bp overlap
ChIP sigmoid colon ENCFF754JQR 135 bp overlap
ChIP spleen ENCFF446ZGT 327 bp overlap
ChIP spleen ENCFF706IUS 414 bp overlap
ChIP stomach ENCFF278MYS 241 bp overlap
ChIP stomach ENCFF820WZN 322 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 184 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 421 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 148 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 406 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 285 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 170 bp overlap
RARB 1 dataset
Motif DE_24h DE_24h-RARB_MA1552.2 13 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 330 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 421 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 262 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 230 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 148 bp overlap
SP2 2 datasets
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 252 bp overlap
SP3 1 dataset
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SP9 1 dataset
Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 142 bp overlap
THAP1 1 dataset
Motif DE_24h DE_24h-THAP1_MA0597.3 8 bp overlap
TP63 6 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 274 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 148 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 128 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 168 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 163 bp overlap
ChIP keratinocyte_epidermal_KDPAF GSE67382.TP63.keratinocyte_epidermal_KDPAF 148 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 140 bp overlap
Wt1 1 dataset
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
ZFP36 3 datasets
ChIP GM12878 ENCFF234WRG 234 bp overlap
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 160 bp overlap
ChIP K-562 ENCSR776CYN.ZFP36.K-562 164 bp overlap
ZMYM3 1 dataset
ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 277 bp overlap
ZNF148 1 dataset
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF16 2 datasets
ChIP HEK293 ENCFF231FLW 296 bp overlap
ChIP HEK293 ENCSR093HXE.ZNF16.HEK293 265 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 247 bp overlap
Zfp335 1 dataset
Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap