chr16 : 6,861,214 6,861,469
255 bp 66 TFs 0 linked genes
This 255 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:6,856,214 – 6,866,469
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP H1 ENCFF295GZO 255 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 255 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 255 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 255 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 255 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 88 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 167 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 255 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 145 bp overlap
CTNNB1 1 dataset
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 255 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 208 bp overlap
ChIP hESC GSE17917.EP300.hESC 234 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 131 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 206 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA6 2 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 161 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 158 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 133 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 100 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 100 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 217 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 255 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 246 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 255 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 255 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 255 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 191 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 223 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 255 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 255 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 228 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 255 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 255 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 255 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 255 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 255 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 255 bp overlap
ChIP hESC GSE20650.NANOG.hESC 255 bp overlap
ChIP hESC GSE18292.NANOG.hESC 253 bp overlap
NIPBL 5 datasets
ChIP WA09 GSE105028.NIPBL.WA09 255 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 255 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 235 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 255 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 221 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 185 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF833NJP 200 bp overlap
POU5F1 10 datasets
ChIP BG03 GSE21614.POU5F1.BG03 184 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 255 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 255 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 168 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 255 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 255 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 255 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 255 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 255 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RNF2 3 datasets
ChIP WA01 GSE104690.RNF2.WA01 255 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 255 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 255 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 243 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 255 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 249 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 255 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 255 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 255 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 255 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 235 bp overlap
SOX2 3 datasets
ChIP H9 GSE46837.SOX2.H9 250 bp overlap
ChIP hESC GSE18292.SOX2.hESC 254 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 255 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 229 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 244 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 241 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 178 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 255 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 255 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 171 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap