chr15:91,101,202–91,101,847

chr15 : 91,101,202 – 91,101,847

645 bp 48 TFs 9 linked genes

This 645 bp open chromatin element is linked to 9 target genes and is bound by 48 transcription factors.

Linked Genes

9 genes

Gene	Expression	Dist. to TSS	Distance	Link type
SV2B		888 bp	At TSS	Proximity
ENSG00000285661		1.4 kb	Proximal	Proximity
VPS33B		79.0 kb	Distal	Multiome
PRC1		107.0 kb	Distal	Multiome
RCCD1		146.2 kb	Distal	Multiome
UNC45A		166.2 kb	Distal	Multiome
HDDC3		169.0 kb	Distal	Multiome
MAN2A2		198.8 kb	Distal	Multiome
FURIN		229.4 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

48 transcription factors

ChIP DU145 GSE47987.AR.DU145 149 bp overlap

ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 197 bp overlap

ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 133 bp overlap

ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 113 bp overlap

ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 248 bp overlap

ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 289 bp overlap

ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 120 bp overlap

ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 145 bp overlap

ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 149 bp overlap

ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 257 bp overlap

ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 312 bp overlap

ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 279 bp overlap

ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 272 bp overlap

ARNTL 1 dataset

ChIP U2OS GSE44236.ARNTL.U2OS 152 bp overlap

ASH2L 1 dataset

ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 242 bp overlap

BAF155 1 dataset

ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 163 bp overlap

ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 220 bp overlap

ChIP K-562 ENCSR000ATW.CBX8.K-562 53 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 245 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 310 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 355 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 188 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 292 bp overlap

ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 122 bp overlap

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 155 bp overlap

ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 180 bp overlap

ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 201 bp overlap

ChIP MCF-7_shCtrl GSE125594.ESR1.MCF-7_shCtrl 157 bp overlap

EZH2 20 datasets

ChIP H1 ENCFF232NZA 63 bp overlap

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 135 bp overlap

ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 347 bp overlap

ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 291 bp overlap

ChIP LNCaP GSE39459.EZH2.LNCaP 200 bp overlap

ChIP LNCaP GSE39459.EZH2.LNCaP 332 bp overlap

ChIP PC-9 ENCSR793USK.EZH2.PC-9 281 bp overlap

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 173 bp overlap

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 198 bp overlap

ChIP T98G GSE112240.EZH2.T98G 110 bp overlap

ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 430 bp overlap

ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 253 bp overlap

ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 175 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 105 bp overlap

ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 92 bp overlap

ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 359 bp overlap

ChIP fibroblast of lung ENCFF479BAW 57 bp overlap

ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 308 bp overlap

ChIP keratinocyte ENCFF070STK 96 bp overlap

ChIP mammary epithelial cell ENCFF224GAI 198 bp overlap

EZH2_phosphoT487 1 dataset

ChIP DOHH2 ENCSR562NOP.EZH2_phosphoT487.DOHH2 229 bp overlap

ChIP SKNO-1 GSE23730.FLI1.SKNO-1 126 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 526 bp overlap

ChIP DE DE-FOXA2-2 360 bp overlap

GABPA 1 dataset

ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 265 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 607 bp overlap

ChIP DE DE-GATA4-2 550 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 581 bp overlap

ChIP DE DE-GATA6-2 613 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 519 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 490 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 398 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 512 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 478 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 538 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 568 bp overlap

HDAC1 1 dataset

ChIP PC-3 GSE147455.HDAC1.PC-3 149 bp overlap

HNRNPLL 1 dataset

ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 117 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 202 bp overlap

ChIP HepG2 ENCFF350YLO 130 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 281 bp overlap

ChIP islet ERP004003.MAFB.islet 331 bp overlap

ChIP HepG2 ENCFF452YUT 277 bp overlap

MAFK 2 datasets

ChIP A549 ENCFF371EPR 381 bp overlap

ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 127 bp overlap

MEF2D 1 dataset

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 227 bp overlap

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 104 bp overlap

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 220 bp overlap

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 218 bp overlap

ChIP GM12878 ENCSR000BHD.PAX5.GM12878 107 bp overlap

ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 174 bp overlap

ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 209 bp overlap

ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 202 bp overlap

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 271 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 377 bp overlap

ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 108 bp overlap

ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 109 bp overlap

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 288 bp overlap

RUNX1 1 dataset

ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 252 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 616 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 389 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 608 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 588 bp overlap

SUZ12 11 datasets

ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 160 bp overlap

ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 236 bp overlap

ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 99 bp overlap

ChIP H1 ENCFF881NFR 145 bp overlap

ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 269 bp overlap

ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 334 bp overlap

ChIP Karpas-422_CPI360-D4 GSE134136.SUZ12.Karpas-422_CPI360-D4 151 bp overlap

ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 524 bp overlap

ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 322 bp overlap

ChIP NT2/D1 ENCFF574SXS 437 bp overlap

ChIP NT2/D1 ENCFF574SXS 645 bp overlap

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 201 bp overlap

ZBTB48 1 dataset

ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 289 bp overlap

ChIP GM12878 ENCSR000BND.ZEB1.GM12878 146 bp overlap

ZNF316 1 dataset

ChIP K562 ENCFF838QCD 417 bp overlap

ZNF341 1 dataset

ChIP HEK293 ENCFF944VMC 56 bp overlap

ZNF398 1 dataset

ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 290 bp overlap