chr15 : 82,272,187 82,272,526
339 bp 62 TFs 2 linked genes
This 339 bp open chromatin element is linked to SAXO2 and EFL1 and is bound by 62 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SAXO2 9.4 kb Proximal Proximity
EFL1 9.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:82,267,187 – 82,277,526
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 323 bp overlap
ChIP K562 ENCFF938UXQ 339 bp overlap
BCL11A 2 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 107 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 130 bp overlap
BRD2 1 dataset
ChIP K-562 GSE140325.BRD2.K-562 107 bp overlap
BRD4 1 dataset
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 312 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 288 bp overlap
ChIP K562 ENCFF963TXY 339 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 283 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 163 bp overlap
ChIP K562 ENCFF673OEZ 176 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 125 bp overlap
CLOCK 1 dataset
ChIP BA10_2 GSE96659.CLOCK.BA10_2 213 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 339 bp overlap
CTCF 1 dataset
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 146 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 311 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 92 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 108 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 252 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 339 bp overlap
ChIP DE DE-FOXA2-2 278 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 132 bp overlap
GATA1 11 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 158 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 253 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 283 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 75 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 339 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 244 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 261 bp overlap
ChIP erythroblast ENCFF867JAR 339 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 339 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 265 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 225 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 245 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 203 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 339 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 339 bp overlap
ChIP DE DE-GATA4-2 339 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 339 bp overlap
ChIP DE DE-GATA6-2 339 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 339 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 339 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 339 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 339 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 339 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 339 bp overlap
ChIP foregut GSE117136.GATA6.foregut 296 bp overlap
Gata3 1 dataset
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 205 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 296 bp overlap
IRF5 1 dataset
Motif DE_48h DE_48h-IRF5_MA1420.1 14 bp overlap
IRF8 1 dataset
Motif DE_48h DE_48h-IRF8_MA0652.2 13 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 228 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 260 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 238 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 226 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 295 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 144 bp overlap
PKNOX1 4 datasets
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 247 bp overlap
ChIP K562 ENCFF236IUS 339 bp overlap
ChIP K562 ENCFF236IUS 170 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 203 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 275 bp overlap
RUNX3 1 dataset
Motif DE_48h DE_48h-RUNX3_MA0684.3 8 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 198 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 339 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 333 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 310 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 339 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 275 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 339 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 339 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 190 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 281 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 257 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 177 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 216 bp overlap
Stat5b 1 dataset
Motif DE_48h DE_48h-Stat5b_MA1625.2 9 bp overlap
TAL1 14 datasets
ChIP CD34 GSE52924.TAL1.CD34 219 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 296 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 194 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 263 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 272 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 263 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 246 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 241 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 267 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 144 bp overlap
ChIP K562 ENCFF620GMX 339 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 293 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 131 bp overlap
TCF12 2 datasets
ChIP K562 ENCFF931DJY 265 bp overlap
ChIP K562 ENCFF931DJY 255 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 115 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 328 bp overlap
TRPS1 1 dataset
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 149 bp overlap
ZNF136 1 dataset
Motif DE_48h DE_48h-ZNF136_MA1588.1 15 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 143 bp overlap
ZNF324 1 dataset
Motif DE_48h DE_48h-ZNF324_MA1977.2 14 bp overlap
ZNF410 2 datasets
Motif DE_48h DE_48h-ZNF410_MA0752.2 16 bp overlap
Motif DE_48h DE_48h-ZNF410_MA0752.2 16 bp overlap
ZNF76 1 dataset
Motif DE_48h DE_48h-ZNF76_MA1716.2 17 bp overlap
Zfp809 1 dataset
Motif DE_48h DE_48h-Zfp809_MA2125.1 9 bp overlap