chr14 : 56,648,496 56,648,846
350 bp 49 TFs 1 linked gene
This 350 bp open chromatin element is linked to ENSG00000258428 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000258428 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:56,643,496 – 56,653,846
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
ARNTL 2 datasets
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 234 bp overlap
ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 208 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 303 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 170 bp overlap
BRD4 6 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 330 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-744 114 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 288 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 299 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 325 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 74 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 139 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 350 bp overlap
CREB1 6 datasets
ChIP GM23338 ENCFF432ZEW 231 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 173 bp overlap
ChIP MCF-7 ENCFF341ZEM 248 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 220 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 188 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 231 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 350 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 332 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 174 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 350 bp overlap
EZH2 2 datasets
ChIP neural progenitor cell ENCFF018MKA 350 bp overlap
ChIP neural progenitor cell ENCFF018MKA 254 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 342 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 201 bp overlap
FOSL2 3 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 145 bp overlap
ChIP HepG2 ENCFF796NIA 224 bp overlap
ChIP NPC GSE122631.FOSL2.NPC 232 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 281 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 350 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 333 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 350 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 350 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 327 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 295 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 263 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 348 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 350 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 242 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 87 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 186 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 211 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MED1 1 dataset
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 139 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 240 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 350 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 273 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 350 bp overlap
ChIP hESC GSE18292.NANOG.hESC 122 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 81 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 230 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 297 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 138 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 81 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 309 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 78 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 285 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 350 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 350 bp overlap
RBPJ 1 dataset
ChIP GIC GSE79734.RBPJ.GIC 287 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 330 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 350 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 349 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 342 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 350 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 8 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 273 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 202 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 226 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 187 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 350 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 350 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 350 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 350 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 350 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 343 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 350 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 277 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 326 bp overlap
SOX2 11 datasets
ChIP HNSC GSE69479.SOX2.HNSC 350 bp overlap
ChIP LK2 GSE137459.SOX2.LK2 350 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 350 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 350 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 350 bp overlap
ChIP NPC GSE122631.SOX2.NPC 219 bp overlap
ChIP hESC GSE18292.SOX2.hESC 82 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 350 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 347 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 279 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 350 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 350 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 308 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 188 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap