chr13 : 99,678,205 99,678,473
268 bp 61 TFs 0 linked genes
This 268 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:99,673,205 – 99,683,473
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AR 6 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 97 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 125 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 129 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 127 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 103 bp overlap
BRD4 6 datasets
ChIP 22Rv1_DHT-ABBV-075 GSE118247.BRD4.22Rv1_DHT-ABBV-075 107 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 62 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 203 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 153 bp overlap
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 85 bp overlap
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 138 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 268 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 100 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 126 bp overlap
ESR1 1 dataset
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 109 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 124 bp overlap
FOXA1 3 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 255 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 108 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 96 bp overlap
GATA6 7 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 268 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 268 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 268 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 268 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 268 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 268 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 154 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 187 bp overlap
HSF1 1 dataset
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 178 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 223 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 218 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 268 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 268 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 268 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 176 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 97 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 181 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 224 bp overlap
MED1 1 dataset
ChIP VCaP GSE148358.MED1.VCaP 247 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 62 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 114 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 131 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 237 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 104 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 93 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 146 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 162 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 228 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 211 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 228 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 177 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 76 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 198 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 247 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 268 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 129 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 192 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 268 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 268 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 203 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 268 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 72 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 144 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 161 bp overlap
RNF2 3 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 268 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 110 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 51 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 64 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 170 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 207 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 268 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 268 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 268 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 268 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 268 bp overlap
SMARCA2 1 dataset
ChIP SK-N-MC_shGFP GSE94275.SMARCA2.SK-N-MC_shGFP 71 bp overlap
SMARCA4 8 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 104 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 268 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 268 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 200 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 268 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 169 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 123 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 70 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 149 bp overlap
SMARCC1 6 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 268 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 268 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 82 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 140 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 268 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 86 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 227 bp overlap
SS18 1 dataset
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 220 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 268 bp overlap
TFAP2B 2 datasets
ChIP SK-N-SH ENCFF869XXQ 130 bp overlap
ChIP SK-N-SH ENCFF869XXQ 268 bp overlap
TP53 1 dataset
ChIP H9 GSE142050.TP53.H9 182 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 116 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 116 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 99 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 212 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 106 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 240 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 147 bp overlap
ZNF585B 1 dataset
ChIP HEK293 ENCFF657XIZ 156 bp overlap
ZNF613 1 dataset
ChIP HEK293T GSE78099.ZNF613.HEK293T 53 bp overlap