chr13 : 64,925,148 – 64,925,773
625 bp 69 TFs 0 linked genes
This 625 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:64,920,148 – 64,930,773
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 64 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 192 bp overlap
BRD4 4 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 111 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 376 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 373 bp overlap
ChIP hESC GSE33281.BRD4.hESC 96 bp overlap
CTCF 5 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 270 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 137 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 160 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 244 bp overlap
EBF1 2 datasets
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 226 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 195 bp overlap
ESR1 6 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 280 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 236 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 432 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 208 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 135 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 226 bp overlap
ESR1_Y537C 1 dataset
ChIP MCF-7_ESR1_mutant_LTED GSE100074.ESR1_Y537C.MCF-7_ESR1_mutant_LTED 273 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 193 bp overlap
Ebf4 2 datasets
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FEZF2 3 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 139 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 89 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 332 bp overlap
GSPT2 2 datasets
ChIP HEK293T GSE35197.GSPT2.HEK293T 197 bp overlap
ChIP HEK293T GSE35197.GSPT2.HEK293T 62 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 282 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
INTS13 1 dataset
ChIP monocyte GSE106359.INTS13.monocyte 154 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 307 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 239 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 154 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 182 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 79 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 64 bp overlap
NFIA 3 datasets
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIC 3 datasets
Motif DE_12h DE_12h-NFIC_MA0161.3 7 bp overlap
Motif DE_48h DE_48h-NFIC_MA0161.3 7 bp overlap
Motif ES_0h ES_0h-NFIC_MA0161.3 7 bp overlap
NFIX 3 datasets
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 210 bp overlap
NR1H2 1 dataset
ChIP WTC11 ENCFF386FJZ 405 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 362 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 384 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 218 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 346 bp overlap
PPARA::RXRA 1 dataset
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 147 bp overlap
REST 72 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 625 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 520 bp overlap
ChIP A549 ENCFF148AIS 423 bp overlap
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif DE_48h DE_48h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP GM12878 ENCFF235NGC 241 bp overlap
ChIP GM12878 ENCFF943QPB 256 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 483 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 433 bp overlap
ChIP GM23338 ENCFF024TCL 207 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 527 bp overlap
ChIP GP5D GSE51234.REST.GP5D 552 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 482 bp overlap
ChIP H1 ENCFF203SWY 540 bp overlap
ChIP H1 ENCFF203SWY 545 bp overlap
ChIP H1 ENCFF429RUE 252 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 487 bp overlap
ChIP HCT116 ENCFF929AYY 269 bp overlap
ChIP HEK293 ENCFF073DOT 467 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 492 bp overlap
ChIP HL-60 ENCFF589LOF 321 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 513 bp overlap
ChIP HeLa-S3 ENCFF911DTC 247 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 480 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 461 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 432 bp overlap
ChIP HepG2 ENCFF122AWR 233 bp overlap
ChIP HepG2 ENCFF800JSL 239 bp overlap
ChIP Ishikawa ENCFF456OHV 469 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 545 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 492 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 306 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 115 bp overlap
ChIP K562 ENCFF430APM 231 bp overlap
ChIP K562 ENCFF688UKW 411 bp overlap
ChIP K562 ENCFF758CZL 573 bp overlap
ChIP MCF-7 ENCFF893RRD 350 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 582 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 340 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 266 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 393 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 379 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 437 bp overlap
ChIP PFSK-1 ENCFF668WMP 193 bp overlap
ChIP PFSK-1 ENCFF845VHA 249 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 421 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 296 bp overlap
ChIP Panc1 ENCFF338WSQ 124 bp overlap
ChIP Panc1 ENCFF518EEQ 211 bp overlap
ChIP Panc1 ENCFF518EEQ 340 bp overlap
ChIP Panc1 ENCFF629OJO 228 bp overlap
ChIP SK-N-SH ENCFF635KBN 269 bp overlap
ChIP SK-N-SH ENCFF861MKH 158 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 196 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 625 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 416 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 62 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 259 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 552 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 625 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 552 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 625 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 389 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 368 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 345 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 381 bp overlap
ChIP liver ENCFF240FWT 485 bp overlap
ChIP liver ENCFF577AZT 537 bp overlap
ChIP liver ENCSR893QWP.REST.liver 232 bp overlap
ChIP liver ENCSR867WPH.REST.liver 168 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 564 bp overlap
RUNX1 1 dataset
ChIP THP-1 GSE79899.RUNX1.THP-1 195 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 241 bp overlap
SMARCA4 2 datasets
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 229 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 206 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 268 bp overlap
TEAD4 3 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 193 bp overlap
ChIP A549 ENCFF243FTL 277 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 302 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
TRIM24 1 dataset
ChIP LNCaP_ETOH GSE69331.TRIM24.LNCaP_ETOH 390 bp overlap
YY1 1 dataset
ChIP HEK293T_control GSE128106.YY1.HEK293T_control 160 bp overlap
ZBTB24 3 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif DE_48h DE_48h-ZBTB24_MA2330.1 10 bp overlap
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 444 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 379 bp overlap
ZBTB6 2 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 147 bp overlap
ZIC1 3 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC4 3 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
ZKSCAN8 1 dataset
ChIP WTC11 ENCFF666HNJ 345 bp overlap
ZNF143 5 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 198 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 213 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 212 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 139 bp overlap
ZNF213 3 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF324 2 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF343 2 datasets
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZNF549 5 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_48h DE_48h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF675 2 datasets
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF816 2 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap
ZNF93 3 datasets
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Motif DE_48h DE_48h-ZNF93_MA1721.2 14 bp overlap
Motif ES_0h ES_0h-ZNF93_MA1721.2 14 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
Zic1::Zic2 3 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_48h DE_48h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 3 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_48h DE_48h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap
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