chr13 : 51,223,347 51,223,788
441 bp 51 TFs 1 linked gene
This 441 bp open chromatin element is linked to FAM124A and is bound by 51 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FAM124A 977 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:51,218,347 – 51,228,788
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 333 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 441 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 216 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 174 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 375 bp overlap
BRD4 2 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 441 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 324 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 259 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 428 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 87 bp overlap
CRX 2 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 167 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 349 bp overlap
CTCF 2 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 200 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 88 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF364PUR 281 bp overlap
ChIP BLaER1 ENCFF460KDD 123 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 211 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 52 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 151 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 68 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 441 bp overlap
EZH2 14 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 441 bp overlap
ChIP GM23248 ENCFF404ZHM 64 bp overlap
ChIP GM23248 ENCFF404ZHM 265 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 426 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 94 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 72 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 59 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 441 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 88 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 150 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 233 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 441 bp overlap
ChIP keratinocyte ENCFF070STK 118 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 131 bp overlap
FOXM1 1 dataset
ChIP Ishikawa ENCFF578VDD 142 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 253 bp overlap
ChIP DE DE-GATA4-2 259 bp overlap
ChIP foregut GSE117136.GATA4.foregut 212 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 238 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 106 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 256 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 228 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 136 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 144 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 210 bp overlap
MED1 1 dataset
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 140 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 307 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 227 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 141 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 343 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 207 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 133 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 369 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 306 bp overlap
ChIP hESC GSE20650.NANOG.hESC 127 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 164 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 198 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 134 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 367 bp overlap
ChIP spleen ENCFF044PYR 199 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 244 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 272 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 303 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 230 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 189 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 161 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 400 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 216 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 175 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 213 bp overlap
RELA 2 datasets
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 257 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 218 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 253 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 123 bp overlap
ChIP liver ENCFF807CIA 202 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 240 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 417 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 206 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 116 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 441 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 114 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 441 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 298 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 171 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 137 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 348 bp overlap
TBP 3 datasets
ChIP hESC GSE122298.TBP.hESC 222 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 89 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 146 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 90 bp overlap
ChIP Ishikawa ENCFF467DDW 290 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 421 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 294 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 354 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 408 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 441 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 423 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 441 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 425 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 276 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 112 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 115 bp overlap