chr13 : 42,283,592 42,283,872
280 bp 51 TFs 0 linked genes
This 280 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:42,278,592 – 42,288,872
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 186 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 215 bp overlap
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 165 bp overlap
ATF2 1 dataset
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 157 bp overlap
BRD4 5 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 280 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 280 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 98 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 249 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 183 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 72 bp overlap
EBF1 5 datasets
ChIP GM12878 ENCFF167CZS 236 bp overlap
ChIP GM12878 ENCFF813OXE 237 bp overlap
ChIP LCL GSE75503.EBF1.LCL 151 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 268 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 168 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 165 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 165 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 134 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 157 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 134 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 211 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 180 bp overlap
FOXA1 9 datasets
ChIP HepG2 ENCFF207NVJ 278 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 93 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 280 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 202 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 242 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 138 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 249 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 280 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 280 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 280 bp overlap
ChIP DE DE-FOXA2-2 280 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 195 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 280 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 280 bp overlap
ChIP DE DE-GATA4-2 280 bp overlap
ChIP foregut GSE117136.GATA4.foregut 246 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 280 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 280 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 280 bp overlap
ChIP DE DE-GATA6-2 280 bp overlap
ChIP foregut GSE117136.GATA6.foregut 280 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 237 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 277 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 245 bp overlap
HNF4A 1 dataset
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 175 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 280 bp overlap
ChIP K562 ENCFF348IBL 280 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 93 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 231 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 212 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 207 bp overlap
JUN 1 dataset
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 87 bp overlap
KDM1A 3 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 280 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 280 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 273 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 248 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 280 bp overlap
MYCN 1 dataset
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 254 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 57 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 156 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 145 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 260 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 177 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 138 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 238 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 266 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 241 bp overlap
RELA 3 datasets
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 184 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 197 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 113 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 177 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 280 bp overlap
ChIP K562 ENCFF059YCJ 280 bp overlap
SPI1 2 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 103 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 148 bp overlap
SRF 2 datasets
ChIP Hep-G2 ENCSR000BLV.SRF.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF625QHW 179 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 141 bp overlap
TFAP4 1 dataset
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 210 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 280 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 263 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 188 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 234 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 280 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 151 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 280 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 188 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 239 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 217 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 280 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 122 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 276 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 166 bp overlap
ZNF629 4 datasets
ChIP HEK293 ENCFF096ELQ 182 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 258 bp overlap
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 268 bp overlap
ChIP HepG2 ENCFF490FFQ 279 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 207 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 213 bp overlap