chr12 : 128,365,854 128,366,257
403 bp 52 TFs 0 linked genes
This 403 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:128,360,854 – 128,371,257
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 249 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 226 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 403 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 309 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 403 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 382 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 403 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 371 bp overlap
BRD4 7 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 216 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 403 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 339 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 128 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 403 bp overlap
ChIP hESC GSE33281.BRD4.hESC 74 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 403 bp overlap
CTCF 7 datasets
ChIP dorsolateral prefrontal cortex ENCFF230SFD 382 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF230SFD 327 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 403 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 290 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 403 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 224 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 403 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 239 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 116 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 159 bp overlap
ERG 1 dataset
ChIP MCF-7 GSE23730.ERG.MCF-7 233 bp overlap
ESR1 1 dataset
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 403 bp overlap
EZH2 7 datasets
ChIP PC-9 ENCSR793USK.EZH2.PC-9 403 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 403 bp overlap
ChIP T98G GSE112240.EZH2.T98G 403 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 403 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 327 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 312 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 306 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 202 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 386 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 403 bp overlap
HSF1 1 dataset
ChIP HCT-116_KOFBXW7 GSE57398.HSF1.HCT-116_KOFBXW7 187 bp overlap
JARID2 1 dataset
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 378 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 92 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 403 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 403 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 205 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 247 bp overlap
MYCN 5 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 403 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 361 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 176 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 256 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 235 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 265 bp overlap
OLIG2 4 datasets
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 336 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 403 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 403 bp overlap
ChIP brain-prefrontal-cortex_2018001 GSE129039.OLIG2.brain-prefrontal-cortex_2018001 266 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 184 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 133 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 145 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 234 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 363 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 403 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 205 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 254 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 403 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 401 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 189 bp overlap
RUNX1 2 datasets
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 291 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 212 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 251 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 376 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 203 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 178 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 352 bp overlap
SPI1 2 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 172 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
STAT3 2 datasets
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 150 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 189 bp overlap
SUZ12 3 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 403 bp overlap
ChIP H1 ENCFF881NFR 403 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 142 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 236 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 100 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 242 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 124 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 178 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap