chr12 : 124,143,773 124,144,142
369 bp 88 TFs 0 linked genes
This 369 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:124,138,773 – 124,149,142
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
Atf3 4 datasets
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
Motif DE_24h DE_24h-Atf3_MA1988.2 7 bp overlap
Motif DE_24h DE_24h-Atf3_MA1988.2 7 bp overlap
BACH1 2 datasets
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
Motif DE_24h DE_24h-BACH1_MA1633.2 9 bp overlap
BATF 4 datasets
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
Motif DE_24h DE_24h-BATF_MA1634.2 7 bp overlap
Motif DE_24h DE_24h-BATF_MA1634.2 7 bp overlap
BATF3 4 datasets
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
Motif DE_24h DE_24h-BATF3_MA0835.3 7 bp overlap
Motif DE_24h DE_24h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 4 datasets
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_24h DE_24h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_24h DE_24h-BATFJUN_MA0462.3 7 bp overlap
BCL6B 1 dataset
Motif DE_24h DE_24h-BCL6B_MA0731.1 17 bp overlap
BNC2 4 datasets
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
Motif DE_24h DE_24h-BNC2_MA1928.2 7 bp overlap
Motif DE_24h DE_24h-BNC2_MA1928.2 7 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 210 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 276 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 225 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
Motif DE_24h DE_24h-FOS_MA0476.2 8 bp overlap
FOS::JUN 2 datasets
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
Motif DE_24h DE_24h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 2 datasets
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
Motif DE_24h DE_24h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 2 datasets
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
Motif DE_24h DE_24h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 2 datasets
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
Motif DE_24h DE_24h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 4 datasets
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
Motif DE_24h DE_24h-FOSL1_MA0477.3 9 bp overlap
Motif DE_24h DE_24h-FOSL1_MA0477.3 9 bp overlap
FOSL1::JUN 2 datasets
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
Motif DE_24h DE_24h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL2 2 datasets
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap
FOSL2::JUN 2 datasets
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 2 datasets
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUND_MA1144.2 9 bp overlap
FOXA1 4 datasets
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 126 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 193 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 241 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 293 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 296 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 220 bp overlap
ChIP DE DE-FOXA2-1 344 bp overlap
ChIP DE DE-FOXA2-2 369 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 272 bp overlap
FOXE1 2 datasets
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Motif DE_24h DE_24h-FOXE1_MA1487.3 12 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 125 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 290 bp overlap
ChIP DE DE-GATA4-2 369 bp overlap
ChIP foregut GSE117136.GATA4.foregut 312 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 328 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 344 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 166 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 369 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 332 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 369 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 348 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 359 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 362 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 125 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 175 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 180 bp overlap
ChIP foregut GSE117136.GATA6.foregut 308 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 326 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 316 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 297 bp overlap
HAND2 2 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 134 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 151 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 237 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 90 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 240 bp overlap
IRF7 1 dataset
Motif DE_24h DE_24h-IRF7_MA0772.2 13 bp overlap
ISL2 2 datasets
Motif DE_24h DE_24h-ISL2_MA0914.2 6 bp overlap
Motif DE_24h DE_24h-ISL2_MA0914.2 6 bp overlap
Isl1 2 datasets
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Motif DE_24h DE_24h-Isl1_MA1608.2 7 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 348 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 369 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 362 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 345 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 226 bp overlap
JUN::JUNB 4 datasets
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
Motif DE_24h DE_24h-JUNJUNB_MA1132.2 8 bp overlap
Motif DE_24h DE_24h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 4 datasets
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
Motif DE_24h DE_24h-JUNB_MA0490.3 9 bp overlap
Motif DE_24h DE_24h-JUNB_MA0490.3 9 bp overlap
JUND 2 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Motif DE_24h DE_24h-JUND_MA0491.3 9 bp overlap
Jun 4 datasets
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap
Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap
KDM1A 3 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 271 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 258 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 326 bp overlap
KLF3 1 dataset
Motif DE_24h DE_24h-KLF3_MA1516.2 10 bp overlap
MAF::NFE2 2 datasets
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_24h DE_24h-MAFNFE2_MA0501.2 11 bp overlap
MAFG::NFE2L1 2 datasets
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_24h DE_24h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 4 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap
Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_24h DE_24h-MEIS2_MA0774.1 8 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
Mafg 2 datasets
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Motif DE_24h DE_24h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 263 bp overlap
NFYB 2 datasets
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Motif DE_24h DE_24h-NFYB_MA0502.3 9 bp overlap
NHLH2 2 datasets
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
Motif DE_24h DE_24h-NHLH2_MA1529.2 16 bp overlap
NKX2-1 2 datasets
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 86 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 245 bp overlap
NKX6-3 2 datasets
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_24h DE_24h-NKX6-3_MA1530.2 8 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 127 bp overlap
Nkx3-1 1 dataset
Motif DE_24h DE_24h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 1 dataset
Motif DE_24h DE_24h-Nkx3-2_MA0122.4 10 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 142 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 262 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 184 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 323 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 104 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 369 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 369 bp overlap
Plagl1 1 dataset
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_24h DE_24h-Pou5f1Sox2_MA0142.1 15 bp overlap
Rfx6 1 dataset
Motif DE_24h DE_24h-Rfx6_MA1724.2 9 bp overlap
Rhox11 2 datasets
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
Motif DE_24h DE_24h-Rhox11_MA0629.2 9 bp overlap
SATB1 3 datasets
ChIP MCF-10A GSE123292.SATB1.MCF-10A 101 bp overlap
ChIP MCF-10A_N-term_CUT1 GSE123292.SATB1.MCF-10A_N-term_CUT1 72 bp overlap
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 167 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 284 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 300 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 267 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 264 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 268 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 123 bp overlap
SOX12 3 datasets
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
Motif DE_24h DE_24h-SOX12_MA1561.2 10 bp overlap
Motif DE_24h DE_24h-SOX12_MA1561.2 10 bp overlap
SREBF1 4 datasets
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
Motif DE_24h DE_24h-SREBF1_MA0595.1 10 bp overlap
Motif DE_24h DE_24h-SREBF1_MA0829.3 10 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 291 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 282 bp overlap
TEAD4 1 dataset
ChIP HUCCT1 GSE68296.TEAD4.HUCCT1 263 bp overlap
TFAP2A 2 datasets
Motif DE_24h DE_24h-TFAP2A_MA0003.5 9 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 161 bp overlap
TFAP2C 1 dataset
Motif DE_24h DE_24h-TFAP2C_MA0814.3 9 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 168 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 289 bp overlap
VENTX 2 datasets
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif DE_24h DE_24h-VENTX_MA0724.1 9 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap