chr12 : 89,372,761 89,372,938
177 bp 41 TFs 1 linked gene
This 177 bp open chromatin element is linked to ENSG00000271327 and is bound by 41 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000271327 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:89,367,761 – 89,377,938
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP liver ENCFF375GID 177 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 155 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 177 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 177 bp overlap
BRD4 8 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 177 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 177 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 177 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 177 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 177 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 177 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 170 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 177 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 128 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 100 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 155 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 177 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 177 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 177 bp overlap
ESR1 4 datasets
ChIP T-47D GSE148277.ESR1.T-47D 99 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 149 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 131 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 147 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 88 bp overlap
ETV4 1 dataset
ChIP T-47D GSE129803.ETV4.T-47D 177 bp overlap
ETV5 1 dataset
ChIP K562 ENCFF336FFA 177 bp overlap
GATA1 2 datasets
ChIP erythroblast ENCFF867JAR 177 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 177 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 115 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 177 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 65 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 75 bp overlap
HNF4A 5 datasets
ChIP IM95 GSE114018.HNF4A.IM95 115 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 97 bp overlap
ChIP liver ENCFF354NRH 159 bp overlap
ChIP liver ENCFF449HPV 148 bp overlap
ChIP liver ERP002306.HNF4A.liver 177 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 177 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 113 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 71 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 141 bp overlap
JUND 3 datasets
ChIP T47D ENCFF318BWX 89 bp overlap
ChIP liver ENCFF007WWT 177 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 169 bp overlap
MAX 2 datasets
ChIP liver ENCFF584QGB 177 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 156 bp overlap
MED1 3 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 151 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 177 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 177 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 95 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 177 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 177 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 177 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 53 bp overlap
RAD21 2 datasets
ChIP liver ENCFF485PAC 145 bp overlap
ChIP liver ENCFF522JHE 139 bp overlap
REST 2 datasets
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 51 bp overlap
ChIP liver ENCSR867WPH.REST.liver 98 bp overlap
RXRA 3 datasets
ChIP liver ENCFF077DAP 177 bp overlap
ChIP liver ENCFF077DAP 177 bp overlap
ChIP liver ENCFF807CIA 177 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 177 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 61 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 144 bp overlap
SP1 3 datasets
ChIP liver ENCFF597LFJ 97 bp overlap
ChIP liver ENCFF597LFJ 177 bp overlap
ChIP liver ENCFF769YSM 86 bp overlap
STAT3 2 datasets
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 78 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 177 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 92 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 85 bp overlap
ChIP K562 ENCFF319QZT 83 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 138 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 138 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 177 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 60 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 114 bp overlap