chr12 : 6,720,678 6,721,033
355 bp 40 TFs 2 linked genes
This 355 bp open chromatin element is linked to ENSG00000288814 and COPS7A and is bound by 40 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000288814 2.8 kb Proximal Proximity
COPS7A 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:6,715,678 – 6,726,033
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR241LIH.AFF1.K-562 234 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 349 bp overlap
ChIP K562 ENCFF938UXQ 355 bp overlap
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 355 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 355 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 355 bp overlap
ChIP DE DE-FOXA2-2 355 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR302AWT.FOXK2.K-562 166 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 208 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 355 bp overlap
ChIP DE DE-GATA4-2 355 bp overlap
ChIP foregut GSE117136.GATA4.foregut 228 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 355 bp overlap
ChIP DE DE-GATA6-2 355 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 317 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 355 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 355 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 355 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 355 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 355 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 355 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 157 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 124 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 355 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 243 bp overlap
ChIP K562 ENCFF928TKZ 355 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 355 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 225 bp overlap
ChIP K562 ENCFF744ALD 215 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 289 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 289 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 320 bp overlap
ChIP K562 ENCFF348IBL 355 bp overlap
KDM1A 4 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 285 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 261 bp overlap
ChIP K562 ENCFF128TYE 148 bp overlap
ChIP K562 ENCFF133OLU 118 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR107GRP.MLLT1.K-562 295 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 240 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 212 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 267 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 208 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 120 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 173 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 176 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 127 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 253 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 231 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 355 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 282 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 213 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 355 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 355 bp overlap
TCF12 1 dataset
ChIP K-562 ENCSR744WOO.TCF12.K-562 312 bp overlap
TCF3 1 dataset
ChIP Ramos GSE139810.TCF3.Ramos 202 bp overlap
ZNF24 3 datasets
ChIP K-562 ENCSR099NCH.ZNF24.K-562 173 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 252 bp overlap
ChIP K562 ENCFF877JCX 348 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 355 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 251 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 348 bp overlap