chr11 : 131,254,289 – 131,254,900

611 bp 64 TFs 2 linked genes

This 611 bp open chromatin element is linked to ENSG00000231698 and NTM and is bound by 64 transcription factors.

Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000231698		844 bp	At TSS	Proximity
NTM		116.2 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

64 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 311 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 222 bp overlap

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 210 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 252 bp overlap

BRD1 1 dataset

ChIP HUES-64 GSE104059.BRD1.HUES-64 265 bp overlap

BRD4 4 datasets

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 69 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 137 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 57 bp overlap

ChIP hESC GSE33281.BRD4.hESC 82 bp overlap

CEBPB 1 dataset

ChIP WA01 ENCSR000EBV.CEBPB.WA01 138 bp overlap

CHD1 2 datasets

ChIP WA01 ENCSR000AQK.CHD1.WA01 274 bp overlap

ChIP WA01 ENCSR000EBU.CHD1.WA01 244 bp overlap

CHD2 1 dataset

ChIP WA01 ENCSR000EBT.CHD2.WA01 128 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCFF432ZEW 224 bp overlap

Ddit3::Cebpa 2 datasets

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

Motif DE_24h DE_24h-Ddit3Cebpa_MA0019.2 10 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

EZH2 2 datasets

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 176 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 180 bp overlap

Ebf2 1 dataset

Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap

FERD3L 2 datasets

Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap

Motif DE_24h DE_24h-FERD3L_MA1485.1 14 bp overlap

FIGLA 3 datasets

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 269 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 262 bp overlap

ChIP DE DE-GATA4-2 313 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-2 276 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 309 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 402 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 260 bp overlap

GCM1 1 dataset

Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 341 bp overlap

GTF2F1 1 dataset

ChIP WA01 ENCSR000EBP.GTF2F1.WA01 137 bp overlap

JUN 7 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 391 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 286 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 113 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 257 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 292 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 346 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 352 bp overlap

JUND 1 dataset

ChIP WA01 ENCSR000BKP.JUND.WA01 116 bp overlap

NANOG 2 datasets

ChIP GM23338 ENCFF065NZG 239 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 265 bp overlap

NFATC3 2 datasets

Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap

Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap

NFIB 1 dataset

Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap

Nfatc1 2 datasets

Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 382 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 362 bp overlap

Prdm4 2 datasets

Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap

Motif DE_24h DE_24h-Prdm4_MA1647.3 11 bp overlap

Ptf1A 2 datasets

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

Motif DE_24h DE_24h-Ptf1A_MA1620.2 8 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 194 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

RUNX3 2 datasets

Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap

Motif DE_24h DE_24h-RUNX3_MA0684.3 8 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 210 bp overlap

SIN3A 2 datasets

ChIP WA01 ENCSR000EBO.SIN3A.WA01 222 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 188 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 261 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 243 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 253 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 225 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 333 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 74 bp overlap

SP4 2 datasets

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 359 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 305 bp overlap

TBP 3 datasets

ChIP WA01 ENCSR000ECB.TBP.WA01 271 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 231 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 146 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 157 bp overlap

TEAD4 1 dataset

ChIP ESC S26-ESC-d0-TEAD4-exp1 330 bp overlap

TFAP2A 2 datasets

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

Motif DE_24h DE_24h-TFAP2A_MA0003.5 9 bp overlap

TFAP2C 3 datasets

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

Motif DE_24h DE_24h-TFAP2C_MA0814.3 9 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 73 bp overlap

THAP1 2 datasets

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

Motif DE_24h DE_24h-THAP1_MA0597.3 8 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 200 bp overlap

USF1 1 dataset

ChIP WTC11 ENCFF699QGS 253 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 140 bp overlap

ZEB1 3 datasets

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap

ZFP14 1 dataset

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 111 bp overlap

ZNF263 2 datasets

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap

ZNF460 2 datasets

Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap

Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap

ZNF547 1 dataset

Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap

Zfp809 2 datasets

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap

Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap

Zfx 1 dataset

Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap