Transcription factors with Perturb-seq knockdown data for ENSG00000231698. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000231698 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000231698, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr11:131,246,000–131,247,079 | 6.7 kb | Proximal (<10kb) Multiome | 247 | |
| chr11:131,253,033–131,254,179 | 146 bp | At TSS Multiome | 201 | |
| chr11:131,254,289–131,254,900 | 1.0 kb | Proximal (<10kb) Multiome | 64 | |
| chr11:131,258,373–131,258,626 | 4.9 kb | Proximal (<10kb) | 3 |
Genomic view of the ENSG00000231698 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.