chr11 : 129,382,425 – 129,382,979

554 bp 69 TFs 1 linked gene

This 554 bp open chromatin element is linked to BARX2 and is bound by 69 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
BARX2		6.6 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

69 transcription factors

ARNT::HIF1A 2 datasets

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

BHLHE22 2 datasets

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD1 1 dataset

ChIP HUES-64 GSE104059.BRD1.HUES-64 180 bp overlap

BRD3 1 dataset

ChIP HEK293T GSE39579.BRD3.HEK293T 130 bp overlap

BRD4 2 datasets

ChIP CHL-1_OTX015 GSE95585.BRD4.CHL-1_OTX015 278 bp overlap

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 389 bp overlap

Bhlha15 1 dataset

Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap

CTCF 1 dataset

ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 303 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF335XTP 303 bp overlap

ChIP BLaER1 ENCFF364PUR 251 bp overlap

Crx 1 dataset

Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap

Dmrt1 1 dataset

Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 155 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 127 bp overlap

ESR1_pS118 1 dataset

ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 382 bp overlap

EZH2 4 datasets

ChIP SF8628 GSE94834.EZH2.SF8628 273 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 225 bp overlap

ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 148 bp overlap

ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 187 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

Foxn1 1 dataset

Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 145 bp overlap

GSC 1 dataset

Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 85 bp overlap

HIF1A 1 dataset

Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap

HIVEP1 1 dataset

ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 190 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

MED1 1 dataset

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 175 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MSANTD3 1 dataset

Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap

MYF5 1 dataset

Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap

MZF1 1 dataset

Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap

NEUROD1 1 dataset

Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap

Neurod2 3 datasets

Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

OLIG2 1 dataset

Motif DE_12h DE_12h-OLIG2_MA0678.1 10 bp overlap

OLIG3 1 dataset

Motif DE_12h DE_12h-OLIG3_MA0827.1 10 bp overlap

OSR2 1 dataset

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 56 bp overlap

OTX1 1 dataset

Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap

Olig2 2 datasets

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 224 bp overlap

PITX1 1 dataset

Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 484 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 509 bp overlap

PRDM4 2 datasets

ChIP HEK293 ENCFF069PHD 383 bp overlap

ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 403 bp overlap

Prdm4 1 dataset

Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap

RHOXF1 1 dataset

Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 248 bp overlap

SIRT6 1 dataset

ChIP WA01 ENCSR000AUS.SIRT6.WA01 123 bp overlap

SMARCC1 2 datasets

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 368 bp overlap

ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 186 bp overlap

Stat2 1 dataset

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

TEAD1 1 dataset

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

TFAP2B 1 dataset

Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap

TFAP2C 1 dataset

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

TFAP2E 1 dataset

Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap

Tcf12 2 datasets

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 2 datasets

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

ZBTB18 1 dataset

Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap

ZBTB6 1 dataset

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 212 bp overlap

ZNF140 1 dataset

Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap

ZNF189 1 dataset

ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 194 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 263 bp overlap

ZNF572 1 dataset

ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 160 bp overlap

ZNF667 1 dataset

Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

ZNF682 1 dataset

Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap

Zfx 1 dataset

Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap