chr10 : 66,604,258 – 66,604,604
346 bp 70 TFs 0 linked genes
This 346 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:66,599,258 – 66,609,604
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 208 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 208 bp overlap
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 251 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 168 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 1 dataset
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE120715.BRD2.K-562_DMSO 142 bp overlap
BRD4 2 datasets
ChIP 402-91 GSE111253.BRD4.402-91 213 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 231 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 321 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 164 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 192 bp overlap
CTCF 113 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 233 bp overlap
ChIP AG04450 ENCFF116DJL 220 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 223 bp overlap
ChIP C4-2B ENCFF821XVN 260 bp overlap
ChIP C4-2B ENCFF821XVN 346 bp overlap
ChIP Caco-2 ENCFF753NZV 336 bp overlap
ChIP Caco-2 ENCFF934QYS 189 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 155 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 164 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 149 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 151 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 131 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 87 bp overlap
ChIP GM23338 ENCFF531QOI 176 bp overlap
ChIP GM23338 ENCFF772DML 91 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 250 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 213 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 183 bp overlap
ChIP H1 ENCFF764RHO 246 bp overlap
ChIP H54 ENCFF255TVO 81 bp overlap
ChIP H9 ENCFF152GTF 224 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 245 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 228 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 215 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 164 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 186 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 168 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 209 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 213 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 224 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 231 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 193 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 188 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 270 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 312 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 250 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 164 bp overlap
ChIP HeLa-S3 ENCFF565UFR 157 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 93 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 112 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 184 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 142 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 155 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 148 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 172 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 190 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 125 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 168 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 124 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 156 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 212 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 150 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 157 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 158 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 139 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 100 bp overlap
ChIP K-562_CRISPRk_N4293 GSE131349.CTCF.K-562_CRISPRk_N4293 125 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 199 bp overlap
ChIP LNCAP ENCFF223HIG 345 bp overlap
ChIP LNCAP ENCFF223HIG 323 bp overlap
ChIP LNCAP ENCFF700QXT 344 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 270 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 120 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 160 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 177 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 346 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 202 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 232 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 230 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 168 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 245 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 230 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 165 bp overlap
ChIP SK-N-SH ENCFF575DMG 175 bp overlap
ChIP SK-N-SH ENCFF731NJX 205 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 284 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 177 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 171 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 134 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 213 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 135 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 346 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 321 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 272 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 346 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 334 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 162 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 171 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 188 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 200 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 273 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 143 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 163 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 123 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 212 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 209 bp overlap
ChIP endodermal cell ENCFF471YCZ 249 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 215 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 314 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 323 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 166 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 136 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 151 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 179 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 202 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 114 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 170 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 126 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 140 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 73 bp overlap
ChIP BLaER1 ENCFF364PUR 302 bp overlap
Dmbx1 1 dataset
Motif DE_12h DE_12h-Dmbx1_MA0883.2 10 bp overlap
ESR1 4 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 214 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 318 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 266 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 185 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 1 dataset
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 1 dataset
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 1 dataset
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL1::JUN 1 dataset
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL1::JUND 1 dataset
Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOSL2::JUN 1 dataset
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 1 dataset
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 306 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 190 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JMJD6 1 dataset
ChIP HEK293T GSE51633.JMJD6.HEK293T 121 bp overlap
JUN::JUNB 1 dataset
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
MAF::NFE2 1 dataset
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MYCN 1 dataset
ChIP Kelly_res GSE115249.MYCN.Kelly_res 129 bp overlap
MZF1 1 dataset
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
PLAGL2 1 dataset
Motif DE_12h DE_12h-PLAGL2_MA1548.2 8 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 157 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 247 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 152 bp overlap
RAD21 13 datasets
ChIP H1 ENCFF698EWO 217 bp overlap
ChIP H1 ENCFF967OJF 207 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 231 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 346 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 80 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 88 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 160 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 214 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 220 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 156 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 187 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 147 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 156 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 339 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 241 bp overlap
SMC1A 2 datasets
ChIP LCL GSE38395.SMC1A.LCL 98 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 260 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 317 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 281 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 146 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 344 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 291 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 221 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 194 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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