chr10 : 46,547,405 46,547,864
459 bp 49 TFs 1 linked gene
This 459 bp open chromatin element is linked to GPRIN2 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GPRIN2 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:46,542,405 – 46,552,864
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
ARID4A 1 dataset
ChIP HepG2 ENCFF142DIE 147 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 269 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 350 bp overlap
BRD4 8 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 87 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 87 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 107 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 138 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 138 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 107 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 103 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 103 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 106 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 131 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 417 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 221 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 191 bp overlap
CTCF 1 dataset
ChIP mesothelial cell of epicardium ENCFF427RFE 249 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 199 bp overlap
ChIP BLaER1 ENCFF896HSY 196 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 238 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 107 bp overlap
ELF1 1 dataset
ChIP A-549 ENCSR000BPT.ELF1.A-549 253 bp overlap
ESR1 15 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 160 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 82 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 97 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 101 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 82 bp overlap
ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 60 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 104 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 80 bp overlap
ChIP MCF-7_estradiol_45min_H4 GSE99626.ESR1.MCF-7_estradiol_45min_H4 214 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 61 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 145 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 100 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 83 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 104 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 187 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 97 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 120 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 58 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 89 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 123 bp overlap
ETS1 1 dataset
ChIP A-549 ENCSR000BPU.ETS1.A-549 65 bp overlap
EZH2 1 dataset
ChIP mammary epithelial cell ENCFF224GAI 63 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 400 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 67 bp overlap
FOSL2 3 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 201 bp overlap
ChIP A-549 ENCSR448TVS.FOSL2.A-549 67 bp overlap
ChIP MDA-MB-231 GSE132098.FOSL2.MDA-MB-231 90 bp overlap
FOXA1 1 dataset
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 139 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 218 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 459 bp overlap
JUN 8 datasets
ChIP A549 ENCFF191QZG 273 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 102 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 128 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 139 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 125 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 115 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 193 bp overlap
ChIP WTC11 ENCFF172UDA 294 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 318 bp overlap
JUND 1 dataset
ChIP A-549 ENCSR000BRF.JUND.A-549 311 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 152 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 271 bp overlap
NR2C2 1 dataset
ChIP WTC11 ENCFF896ODS 196 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 54 bp overlap
PBX3 2 datasets
ChIP A-549 ENCSR000BTN.PBX3.A-549 128 bp overlap
ChIP A-549 ENCSR000BTN.PBX3.A-549 51 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 298 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 88 bp overlap
ChIP Peyer's patch ENCFF767HVN 209 bp overlap
REST 2 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 425 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 75 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCFF513YVP 120 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 106 bp overlap
SIN3A 1 dataset
ChIP A-549 ENCSR000BRM.SIN3A.A-549 459 bp overlap
SMAD3 2 datasets
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 174 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 52 bp overlap
SOX4 1 dataset
ChIP MDA-MB-231_TGFb GSE104760.SOX4.MDA-MB-231_TGFb 132 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 180 bp overlap
STAT3 1 dataset
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 82 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 120 bp overlap
YY1 1 dataset
ChIP A-549 ENCSR000BPM.YY1.A-549 154 bp overlap
ZBTB40 2 datasets
ChIP K562 ENCFF952IUD 342 bp overlap
ChIP K562 ENCFF952IUD 141 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 381 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 85 bp overlap
ZNF184 1 dataset
ChIP K562 ENCFF075YMN 225 bp overlap