chr1 : 175,797,630 – 175,797,920
290 bp 54 TFs 0 linked genes
This 290 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:175,792,630 – 175,802,920
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 212 bp overlap
CTCF 1 dataset
Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap
DMRTA2 3 datasets
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 259 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 170 bp overlap
ERF::FOXI1 5 datasets
Motif DE_24h DE_24h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_36h DE_36h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_48h DE_48h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_72h DE_72h-ERFFOXI1_MA1935.2 10 bp overlap
ETV2::FIGLA 5 datasets
Motif DE_24h DE_24h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_36h DE_36h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_48h DE_48h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_60h DE_60h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_72h DE_72h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV2::FOXI1 5 datasets
Motif DE_24h DE_24h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_48h DE_48h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_72h DE_72h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FIGLA 5 datasets
Motif DE_24h DE_24h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_36h DE_36h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_48h DE_48h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_60h DE_60h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_72h DE_72h-ETV5FIGLA_MA1945.2 14 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 246 bp overlap
FLI1::FOXI1 5 datasets
Motif DE_24h DE_24h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_48h DE_48h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_72h DE_72h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 269 bp overlap
FOXJ2::ELF1 5 datasets
Motif DE_24h DE_24h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_36h DE_36h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_48h DE_48h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_60h DE_60h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_72h DE_72h-FOXJ2ELF1_MA1952.2 11 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 290 bp overlap
ChIP DE DE-GATA4-2 290 bp overlap
ChIP foregut GSE117136.GATA4.foregut 246 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 290 bp overlap
ChIP DE DE-GATA6-2 290 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 290 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 290 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 290 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 290 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 290 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 290 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 286 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 290 bp overlap
IKZF1 5 datasets
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
IRF2 1 dataset
Motif DE_48h DE_48h-IRF2_MA0051.2 16 bp overlap
IRF3 5 datasets
Motif DE_24h DE_24h-IRF3_MA1418.2 17 bp overlap
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
Motif DE_48h DE_48h-IRF3_MA1418.2 17 bp overlap
Motif DE_60h DE_60h-IRF3_MA1418.2 17 bp overlap
Motif DE_72h DE_72h-IRF3_MA1418.2 17 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 88 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MAZ 5 datasets
Motif DE_24h DE_24h-MAZ_MA1522.2 8 bp overlap
Motif DE_36h DE_36h-MAZ_MA1522.2 8 bp overlap
Motif DE_48h DE_48h-MAZ_MA1522.2 8 bp overlap
Motif DE_60h DE_60h-MAZ_MA1522.2 8 bp overlap
Motif DE_72h DE_72h-MAZ_MA1522.2 8 bp overlap
MXI1 5 datasets
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 136 bp overlap
Msgn1 4 datasets
Motif DE_24h DE_24h-Msgn1_MA1524.3 10 bp overlap
Motif DE_36h DE_36h-Msgn1_MA1524.3 10 bp overlap
Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap
Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 265 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 214 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 194 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 257 bp overlap
ChIP hESC GSE18292.NANOG.hESC 198 bp overlap
NFKB2 1 dataset
Motif DE_48h DE_48h-NFKB2_MA0778.2 11 bp overlap
OSR2 4 datasets
Motif DE_24h DE_24h-OSR2_MA1646.2 8 bp overlap
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
Motif DE_48h DE_48h-OSR2_MA1646.2 8 bp overlap
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
PATZ1 5 datasets
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
Motif DE_48h DE_48h-PATZ1_MA1961.2 11 bp overlap
Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap
Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap
RBPJ 1 dataset
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Rhox11 4 datasets
Motif DE_24h DE_24h-Rhox11_MA0629.2 9 bp overlap
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap
Runx1 1 dataset
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 290 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 223 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 286 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 169 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 100 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 223 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 233 bp overlap
Spz1 3 datasets
Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap
Motif DE_48h DE_48h-Spz1_MA0111.1 11 bp overlap
Motif DE_72h DE_72h-Spz1_MA0111.1 11 bp overlap
Stat2 4 datasets
Motif DE_24h DE_24h-Stat2_MA1623.2 10 bp overlap
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
Motif DE_48h DE_48h-Stat2_MA1623.2 10 bp overlap
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 230 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 274 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 137 bp overlap
TFAP4 5 datasets
Motif DE_24h DE_24h-TFAP4_MA1570.1 10 bp overlap
Motif DE_36h DE_36h-TFAP4_MA1570.1 10 bp overlap
Motif DE_48h DE_48h-TFAP4_MA1570.1 10 bp overlap
Motif DE_60h DE_60h-TFAP4_MA1570.1 10 bp overlap
Motif DE_72h DE_72h-TFAP4_MA1570.1 10 bp overlap
TFAP4::ETV1 5 datasets
Motif DE_24h DE_24h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_36h DE_36h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_48h DE_48h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_60h DE_60h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_72h DE_72h-TFAP4ETV1_MA1966.2 13 bp overlap
TFEB 5 datasets
Motif DE_24h DE_24h-TFEB_MA0692.2 8 bp overlap
Motif DE_36h DE_36h-TFEB_MA0692.2 8 bp overlap
Motif DE_48h DE_48h-TFEB_MA0692.2 8 bp overlap
Motif DE_60h DE_60h-TFEB_MA0692.2 8 bp overlap
Motif DE_72h DE_72h-TFEB_MA0692.2 8 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 235 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 241 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 206 bp overlap
ZIM3 4 datasets
Motif DE_24h DE_24h-ZIM3_MA1709.2 11 bp overlap
Motif DE_36h DE_36h-ZIM3_MA1709.2 11 bp overlap
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
ZNF148 5 datasets
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 180 bp overlap
ZNF549 5 datasets
Motif DE_24h DE_24h-ZNF549_MA1728.2 8 bp overlap
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
Motif DE_48h DE_48h-ZNF549_MA1728.2 8 bp overlap
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
Motif DE_72h DE_72h-ZNF549_MA1728.2 8 bp overlap
ZNF582 1 dataset
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
ZNF708 1 dataset
Motif DE_48h DE_48h-ZNF708_MA1730.2 9 bp overlap
Zic2 5 datasets
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap
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