chr1 : 18,176,108 – 18,176,904
796 bp 59 TFs 1 linked gene
This 796 bp open chromatin element is linked to IGSF21 and is bound by 59 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
IGSF21 68.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:18,171,108 – 18,181,904
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 102 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 115 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap
BRD4 2 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 181 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 123 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 215 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 257 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 352 bp overlap
CTCF 1 dataset
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 273 bp overlap
EBF1 2 datasets
ChIP MUTUL GSE75503.EBF1.MUTUL 350 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 256 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 226 bp overlap
ChIP hESC GSE26097.EOMES.hESC 476 bp overlap
ESR1 1 dataset
ChIP ZR751_E2_TAM ERP000380.ESR1.ZR751_E2_TAM 126 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 365 bp overlap
EZH2 3 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 458 bp overlap
ChIP HeLa-S3 ENCFF318LHU 427 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 657 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 418 bp overlap
ChIP DE DE-FOXA2-2 378 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 251 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 96 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 796 bp overlap
ChIP DE DE-GATA4-2 796 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 796 bp overlap
ChIP DE DE-GATA6-2 796 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 765 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 698 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 648 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 143 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 428 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 747 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 770 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 438 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 201 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 133 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 313 bp overlap
HNRNPH1 1 dataset
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 289 bp overlap
KDM1A 4 datasets
ChIP H1 ENCFF696SGD 244 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 274 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 159 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 190 bp overlap
KLF1 1 dataset
ChIP K-562 ENCSR550HCT.KLF1.K-562 276 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 142 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 53 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 271 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 379 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 97 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 447 bp overlap
ChIP hESC GSE18292.NANOG.hESC 97 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 257 bp overlap
ChIP D283-Med GSE92582.NEUROD1.D283-Med 127 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 215 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 499 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 155 bp overlap
NFIB 2 datasets
ChIP MCF-7 ENCFF925CGH 89 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 60 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 545 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 301 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 379 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 137 bp overlap
ChIP K562 ENCFF248CGR 176 bp overlap
ChIP K562 ENCFF957ORK 176 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 101 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 418 bp overlap
RUNX1 1 dataset
ChIP 697 GSE138031.RUNX1.697 161 bp overlap
SIN3A 2 datasets
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 125 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 140 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 796 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 206 bp overlap
SMARCA4 1 dataset
ChIP NSC GSE125033.SMARCA4.NSC 146 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 263 bp overlap
SOX17_M 2 datasets
ChIP DE_D2 DED2-SOX17-M_Batch_II 89 bp overlap
ChIP DE_D2 DED2-SOX17-M_Batch_II 275 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 172 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 389 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 358 bp overlap
TBP 1 dataset
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 113 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 205 bp overlap
TCF3 2 datasets
ChIP NPC GSE154479.TCF3.NPC 389 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 306 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 250 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 758 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 796 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 87 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 63 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 233 bp overlap
USF2 2 datasets
ChIP H1 ENCFF434EDF 195 bp overlap
ChIP WTC11 ENCFF139JAW 291 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 93 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 97 bp overlap
ChIP K562 ENCFF255RZG 146 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 123 bp overlap
ChIP K562 ENCFF361LXT 181 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 186 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 178 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 294 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 81 bp overlap
ZNF768 3 datasets
ChIP HEK293 ENCFF579QSI 168 bp overlap
ChIP HEK293 ENCSR070HWF.ZNF768.HEK293 103 bp overlap
ChIP HepG2 ENCFF388QCK 90 bp overlap
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