chr9 : 8,694,829 – 8,695,550

721 bp 63 TFs 0 linked genes

This 721 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

63 transcription factors

AR 3 datasets

ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 89 bp overlap

ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 128 bp overlap

ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 429 bp overlap

ASXL3 1 dataset

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 238 bp overlap

BAP1 1 dataset

ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 721 bp overlap

BRD4 3 datasets

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 472 bp overlap

ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 231 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 658 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 199 bp overlap

DUXA 1 dataset

Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap

Dux 1 dataset

Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap

EGR1 2 datasets

Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap

ChIP WA01 ENCSR000BJA.EGR1.WA01 126 bp overlap

EGR2 1 dataset

Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap

EGR3 1 dataset

Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap

EGR4 1 dataset

Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap

ESR1 1 dataset

ChIP ZR751 ERP000783.ESR1.ZR751 190 bp overlap

FOXA1 21 datasets

ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 356 bp overlap

ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 136 bp overlap

ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 200 bp overlap

ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 184 bp overlap

ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 361 bp overlap

ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 431 bp overlap

ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 466 bp overlap

ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 501 bp overlap

ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 467 bp overlap

ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 507 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 442 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 450 bp overlap

ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 445 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 442 bp overlap

ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 271 bp overlap

ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 436 bp overlap

ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 330 bp overlap

ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 507 bp overlap

ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 447 bp overlap

ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 371 bp overlap

ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 169 bp overlap

GATA2 1 dataset

ChIP ESF GSE108408.GATA2.ESF 222 bp overlap

GATA3 1 dataset

ChIP T-47D ENCSR000BMX.GATA3.T-47D 182 bp overlap

GATA6 2 datasets

ChIP DE_D1 S41-DE-d1-GATA6-exp2 358 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 459 bp overlap

HOXB13 1 dataset

ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 69 bp overlap

KLF1 1 dataset

Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap

KLF10 1 dataset

Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap

KLF11 1 dataset

Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap

KLF14 1 dataset

Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap

KLF16 1 dataset

Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap

KLF17 1 dataset

Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap

KLF2 1 dataset

Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap

KLF4 1 dataset

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

KLF9 1 dataset

Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap

MAX 3 datasets

ChIP NCI-H128 GSE41105.MAX.NCI-H128 455 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 181 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 182 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap

MEIS2 1 dataset

Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap

MYB 1 dataset

ChIP Loucy GSE94000.MYB.Loucy 381 bp overlap

MYC 2 datasets

ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 453 bp overlap

ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 136 bp overlap

NKX2-1 1 dataset

ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 150 bp overlap

NR1D2 1 dataset

Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap

PATZ1 1 dataset

Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap

PBX1 1 dataset

ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 414 bp overlap

PBX2 1 dataset

Motif DE_12h DE_12h-PBX2_MA1113.3 9 bp overlap

POU4F1 1 dataset

Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap

POU4F3 1 dataset

Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap

PRDM1 1 dataset

Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap

PRDM6 2 datasets

ChIP HEK293 ENCFF283AJL 445 bp overlap

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 301 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

RAD21 1 dataset

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 173 bp overlap

RBPJ 2 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 163 bp overlap

RREB1 1 dataset

Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap

SMARCA4 3 datasets

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 344 bp overlap

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 154 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 558 bp overlap

SMARCC1 2 datasets

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 662 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 209 bp overlap

SOX11 1 dataset

ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 367 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 155 bp overlap

SP8 1 dataset

Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap

SP9 1 dataset

Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap

Sox17 1 dataset

Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap

Sox7 1 dataset

Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 153 bp overlap

TAL1 1 dataset

ChIP MOLT-3 GSE59657.TAL1.MOLT-3 157 bp overlap

TCF3 1 dataset

ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 261 bp overlap

TERF1 1 dataset

ChIP LCL GSE55053.TERF1.LCL 200 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 171 bp overlap

ZBTB6 1 dataset

ChIP HEK293 GSE76494.ZBTB6.HEK293 207 bp overlap

ZNF701 1 dataset

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap

ZNF740 1 dataset

Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap