chr9 : 72,989 – 73,599
610 bp 42 TFs 3 linked genes
This 610 bp open chromatin element is linked to ENSG00000284986, ZNG1A, and DOCK8 and is bound by 42 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000284986 at TSS At TSS Proximity
ZNG1A 105.7 kb Distal Multiome
DOCK8 141.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:67,989 – 78,599
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
BCOR 3 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 58 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 164 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 175 bp overlap
BRD2 10 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 442 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 226 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 419 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 433 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 433 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 169 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 169 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 195 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 195 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 54 bp overlap
BRD4 5 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 313 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 185 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 185 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 404 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 404 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 156 bp overlap
CTCF 19 datasets
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 516 bp overlap
ChIP CD14-positive monocyte ENCFF590KQU 306 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP RWPE2 ENCFF911IEE 594 bp overlap
ChIP VCaP ENCFF858YQT 486 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 176 bp overlap
ChIP endodermal cell ENCFF471YCZ 297 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 269 bp overlap
ChIP gastroesophageal sphincter ENCFF918KPI 337 bp overlap
ChIP heart left ventricle ENCFF354HOQ 295 bp overlap
ChIP heart left ventricle ENCFF354HOQ 461 bp overlap
ChIP heart left ventricle ENCFF548XHH 298 bp overlap
ChIP heart right ventricle ENCFF022KFI 293 bp overlap
ChIP heart right ventricle ENCFF063GTP 277 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 297 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 413 bp overlap
ChIP uterus ENCFF837OEY 242 bp overlap
CTCFL 1 dataset
ChIP delta-47 GSE70764.CTCFL.delta-47 252 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 60 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 610 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 283 bp overlap
EZH2 15 datasets
ChIP A673 ENCFF790MVL 237 bp overlap
ChIP GM23338 ENCFF613YON 81 bp overlap
ChIP H1 ENCFF232NZA 610 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 325 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 343 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 446 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 437 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 136 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 216 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 168 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 211 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP neural progenitor cell ENCFF018MKA 106 bp overlap
ChIP neural progenitor cell ENCFF018MKA 548 bp overlap
ChIP neural progenitor cell ENCFF472NFV 610 bp overlap
JARID2 8 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 610 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 226 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 269 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 610 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 610 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 87 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 598 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 206 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 412 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 356 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 496 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MTF2 1 dataset
ChIP HepG2 ENCFF916FZN 582 bp overlap
PCGF1 2 datasets
ChIP WA01 GSE104690.PCGF1.WA01 195 bp overlap
ChIP WA01 GSE104690.PCGF1.WA01 194 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 306 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 590 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 610 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 590 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 595 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 186 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 59 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 415 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 237 bp overlap
SUZ12 7 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 441 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 234 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 204 bp overlap
ChIP H1 ENCFF881NFR 610 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 199 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 224 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 195 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 272 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 50 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
ZNF777 2 datasets
ChIP Hep-G2 ENCSR068ZQR.ZNF777.Hep-G2 132 bp overlap
ChIP HepG2 ENCFF362XDA 438 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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