chr8 : 57,974,811 – 57,975,019
208 bp 78 TFs 1 linked gene
This 208 bp open chromatin element is linked to LINC01602 and is bound by 78 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01602 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:57,969,811 – 57,980,019
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 94 bp overlap
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 208 bp overlap
BARX1 2 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 208 bp overlap
BSX 2 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 169 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 108 bp overlap
DLX1 2 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DPF2 2 datasets
ChIP MCF-7 ENCFF712EXQ 170 bp overlap
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 113 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 2 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
ESR1 1 dataset
ChIP T-47D ENCSR000BKN.ESR1.T-47D 179 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 137 bp overlap
GATA2 1 dataset
ChIP WA09 GSE105081.GATA2.WA09 98 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF352QVM 208 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 183 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 145 bp overlap
GATA6 1 dataset
ChIP DE_D1 S14-DE-d1-GATA6-exp1 208 bp overlap
GBX2 2 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GRHL2 3 datasets
ChIP LNCaP GSE80256.GRHL2.LNCaP 208 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 60 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 138 bp overlap
HESX1 2 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXA7 2 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 208 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 2 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 150 bp overlap
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 208 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 145 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
LBX2 2 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MAF 1 dataset
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
MAF::NFE2 1 dataset
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
MAFA 1 dataset
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
MAFG::NFE2L1 1 dataset
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 208 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 137 bp overlap
MSX1 2 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 163 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Msx3 2 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 147 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 208 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 200 bp overlap
NELFE 1 dataset
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 55 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nobox 2 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
OVOL1 2 datasets
ChIP MCF-7 ENCFF537GWI 147 bp overlap
ChIP MCF-7 ENCSR829WBA.OVOL1.MCF-7 85 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 208 bp overlap
RARA 2 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 208 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 208 bp overlap
RAX 2 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 208 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 208 bp overlap
RFX7 1 dataset
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
SMARCA4 1 dataset
ChIP G-401_NoDox GSE71504.SMARCA4.G-401_NoDox 77 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 121 bp overlap
SMARCC1 2 datasets
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 190 bp overlap
ChIP G-401_NoDox GSE71504.SMARCC1.G-401_NoDox 208 bp overlap
SOX18 1 dataset
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 139 bp overlap
STAT3 2 datasets
ChIP HCC1143_EtOH GSE85579.STAT3.HCC1143_EtOH 199 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 208 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 87 bp overlap
TEAD4 3 datasets
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 62 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 64 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 103 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 208 bp overlap
TFAP2C 4 datasets
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 132 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 208 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 208 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 149 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 144 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 178 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 148 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 153 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
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